Hb_000389_250

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig389: 430806-436023
Sequence    

Annotation

kegg
ID pop:POPTR_0001s06650g
description POPTRDRAFT_178418; hypothetical protein
nr
ID KDP21085.1
description hypothetical protein JCGZ_21556 [Jatropha curcas]
swissprot
ID Q9LRR4
description Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 SV=1
trembl
ID A0A067JM58
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21556 PE=4 SV=1
Gene Ontology
ID GO:0043531
description disease resistance rpp13-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000389_250 0.0 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21556 [Jatropha curcas]
2 Hb_051450_010 0.1414225889 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000836_590 0.1497617602 - - hypothetical protein JCGZ_14318 [Jatropha curcas]
4 Hb_002205_260 0.1499239181 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
5 Hb_055706_010 0.154740305 - - hypothetical protein JCGZ_22222 [Jatropha curcas]
6 Hb_089140_020 0.164469154 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
7 Hb_025030_010 0.1653065821 - - -
8 Hb_189242_010 0.1663690866 - - hypothetical protein B456_013G0075002, partial [Gossypium raimondii]
9 Hb_005882_020 0.1706595576 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
10 Hb_035391_010 0.1717118717 - - TMV resistance protein N, putative [Ricinus communis]
11 Hb_002193_050 0.1729066836 - - PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
12 Hb_117602_010 0.1759087451 - - dimethylaniline monooxygenase, putative [Ricinus communis]
13 Hb_002660_090 0.1824006552 - - hypothetical protein JCGZ_16500 [Jatropha curcas]
14 Hb_008667_020 0.1833254995 - - PREDICTED: uncharacterized protein LOC101299609 [Fragaria vesca subsp. vesca]
15 Hb_003582_020 0.1846838207 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Eucalyptus grandis]
16 Hb_001565_050 0.187020263 - - PREDICTED: receptor-like protein kinase 5 [Eucalyptus grandis]
17 Hb_004931_050 0.1885297596 transcription factor TF Family: MYB-related Transcription repressor MYB4, putative [Ricinus communis]
18 Hb_034132_010 0.1905894585 - - hypothetical protein B456_007G015400 [Gossypium raimondii]
19 Hb_168039_020 0.1935092745 - - -
20 Hb_028841_020 0.1950094367 - - hypothetical protein CISIN_1g041345mg [Citrus sinensis]

Gene co-expression network

sample Hb_000389_250 Hb_000389_250 Hb_051450_010 Hb_051450_010 Hb_000389_250--Hb_051450_010 Hb_000836_590 Hb_000836_590 Hb_000389_250--Hb_000836_590 Hb_002205_260 Hb_002205_260 Hb_000389_250--Hb_002205_260 Hb_055706_010 Hb_055706_010 Hb_000389_250--Hb_055706_010 Hb_089140_020 Hb_089140_020 Hb_000389_250--Hb_089140_020 Hb_025030_010 Hb_025030_010 Hb_000389_250--Hb_025030_010 Hb_051450_010--Hb_025030_010 Hb_168039_020 Hb_168039_020 Hb_051450_010--Hb_168039_020 Hb_000510_350 Hb_000510_350 Hb_051450_010--Hb_000510_350 Hb_000890_190 Hb_000890_190 Hb_051450_010--Hb_000890_190 Hb_002193_050 Hb_002193_050 Hb_051450_010--Hb_002193_050 Hb_181810_010 Hb_181810_010 Hb_000836_590--Hb_181810_010 Hb_006395_020 Hb_006395_020 Hb_000836_590--Hb_006395_020 Hb_000111_220 Hb_000111_220 Hb_000836_590--Hb_000111_220 Hb_001405_250 Hb_001405_250 Hb_000836_590--Hb_001405_250 Hb_000836_590--Hb_002205_260 Hb_007407_010 Hb_007407_010 Hb_002205_260--Hb_007407_010 Hb_000133_060 Hb_000133_060 Hb_002205_260--Hb_000133_060 Hb_012545_080 Hb_012545_080 Hb_002205_260--Hb_012545_080 Hb_001289_030 Hb_001289_030 Hb_002205_260--Hb_001289_030 Hb_002660_090 Hb_002660_090 Hb_002205_260--Hb_002660_090 Hb_002205_260--Hb_089140_020 Hb_005882_020 Hb_005882_020 Hb_055706_010--Hb_005882_020 Hb_055706_010--Hb_089140_020 Hb_035391_010 Hb_035391_010 Hb_055706_010--Hb_035391_010 Hb_000522_120 Hb_000522_120 Hb_055706_010--Hb_000522_120 Hb_189242_010 Hb_189242_010 Hb_055706_010--Hb_189242_010 Hb_048653_040 Hb_048653_040 Hb_055706_010--Hb_048653_040 Hb_089140_020--Hb_189242_010 Hb_001168_100 Hb_001168_100 Hb_089140_020--Hb_001168_100 Hb_007383_050 Hb_007383_050 Hb_089140_020--Hb_007383_050 Hb_004267_070 Hb_004267_070 Hb_089140_020--Hb_004267_070 Hb_001411_150 Hb_001411_150 Hb_089140_020--Hb_001411_150 Hb_028841_020 Hb_028841_020 Hb_025030_010--Hb_028841_020 Hb_001568_060 Hb_001568_060 Hb_025030_010--Hb_001568_060 Hb_001021_110 Hb_001021_110 Hb_025030_010--Hb_001021_110 Hb_007433_020 Hb_007433_020 Hb_025030_010--Hb_007433_020 Hb_025030_010--Hb_000510_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.193408 0.0342036 0.0106392 0.00743097 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0130906 0

CAGE analysis