Hb_000390_160

Information

Type -
Description -
Location Contig390: 183306-190000
Sequence    

Annotation

kegg
ID rcu:RCOM_1327470
description Ribokinase, putative (EC:2.7.1.20)
nr
ID XP_012070241.1
description PREDICTED: adenosine kinase [Jatropha curcas]
swissprot
ID Q55480
description Uncharacterized sugar kinase slr0537 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0537 PE=3 SV=1
trembl
ID A0A067KX13
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02558 PE=3 SV=1
Gene Ontology
ID GO:0009507
description adenosine kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39097: 183467-190073
cDNA
(Sanger)
(ID:Location)		 051_L03.ab1: 187932-190073

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000390_160 0.0 - - PREDICTED: adenosine kinase [Jatropha curcas]
2 Hb_000069_760 0.0608600239 - - PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Jatropha curcas]
3 Hb_000049_100 0.0692077222 - - Photosystem II reaction center W protein, putative [Ricinus communis]
4 Hb_003777_080 0.0824379759 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Populus euphratica]
5 Hb_001141_340 0.0858662477 - - PREDICTED: cysteine synthase [Jatropha curcas]
6 Hb_001958_060 0.0866461432 - - PREDICTED: calcium uptake protein 1, mitochondrial-like [Jatropha curcas]
7 Hb_005210_010 0.0895850534 - - PREDICTED: uncharacterized protein LOC105638163 [Jatropha curcas]
8 Hb_153258_040 0.091009618 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Jatropha curcas]
9 Hb_001268_170 0.0922027967 - - glycerophosphodiester phosphodiesterase, putative [Ricinus communis]
10 Hb_003020_120 0.0944548906 - - PREDICTED: protein TIC 62, chloroplastic [Populus euphratica]
11 Hb_000099_120 0.0950643267 - - PREDICTED: GDT1-like protein 1, chloroplastic isoform X3 [Jatropha curcas]
12 Hb_000392_470 0.0950861905 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007044_270 0.0950933145 - - PREDICTED: uncharacterized protein LOC105638707 isoform X2 [Jatropha curcas]
14 Hb_000906_080 0.0954378317 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
15 Hb_001564_120 0.0964328588 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic [Populus euphratica]
16 Hb_087599_010 0.0983150775 - - PREDICTED: tropinone reductase homolog [Solanum tuberosum]
17 Hb_003632_020 0.099205477 - - calcium-binding family protein [Populus trichocarpa]
18 Hb_001277_350 0.0993181938 - - early light-induced protein, putative [Ricinus communis]
19 Hb_001195_290 0.0996283895 - - PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
20 Hb_003847_070 0.10002313 - - PREDICTED: violaxanthin de-epoxidase, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000390_160 Hb_000390_160 Hb_000069_760 Hb_000069_760 Hb_000390_160--Hb_000069_760 Hb_000049_100 Hb_000049_100 Hb_000390_160--Hb_000049_100 Hb_003777_080 Hb_003777_080 Hb_000390_160--Hb_003777_080 Hb_001141_340 Hb_001141_340 Hb_000390_160--Hb_001141_340 Hb_001958_060 Hb_001958_060 Hb_000390_160--Hb_001958_060 Hb_005210_010 Hb_005210_010 Hb_000390_160--Hb_005210_010 Hb_000185_010 Hb_000185_010 Hb_000069_760--Hb_000185_010 Hb_006132_080 Hb_006132_080 Hb_000069_760--Hb_006132_080 Hb_002121_050 Hb_002121_050 Hb_000069_760--Hb_002121_050 Hb_156093_010 Hb_156093_010 Hb_000069_760--Hb_156093_010 Hb_000069_760--Hb_003777_080 Hb_000254_130 Hb_000254_130 Hb_000049_100--Hb_000254_130 Hb_003120_020 Hb_003120_020 Hb_000049_100--Hb_003120_020 Hb_002375_030 Hb_002375_030 Hb_000049_100--Hb_002375_030 Hb_003632_020 Hb_003632_020 Hb_000049_100--Hb_003632_020 Hb_010326_020 Hb_010326_020 Hb_000049_100--Hb_010326_020 Hb_087599_010 Hb_087599_010 Hb_003777_080--Hb_087599_010 Hb_001975_100 Hb_001975_100 Hb_003777_080--Hb_001975_100 Hb_153258_040 Hb_153258_040 Hb_003777_080--Hb_153258_040 Hb_005063_030 Hb_005063_030 Hb_003777_080--Hb_005063_030 Hb_004970_060 Hb_004970_060 Hb_003777_080--Hb_004970_060 Hb_003777_080--Hb_156093_010 Hb_001141_340--Hb_000069_760 Hb_001141_340--Hb_003120_020 Hb_002592_040 Hb_002592_040 Hb_001141_340--Hb_002592_040 Hb_004899_190 Hb_004899_190 Hb_001141_340--Hb_004899_190 Hb_001268_170 Hb_001268_170 Hb_001141_340--Hb_001268_170 Hb_001292_030 Hb_001292_030 Hb_001958_060--Hb_001292_030 Hb_001277_350 Hb_001277_350 Hb_001958_060--Hb_001277_350 Hb_001958_060--Hb_001975_100 Hb_001958_060--Hb_005063_030 Hb_006570_030 Hb_006570_030 Hb_001958_060--Hb_006570_030 Hb_000230_420 Hb_000230_420 Hb_001958_060--Hb_000230_420 Hb_005523_040 Hb_005523_040 Hb_005210_010--Hb_005523_040 Hb_005210_010--Hb_000049_100 Hb_001195_290 Hb_001195_290 Hb_005210_010--Hb_001195_290 Hb_000856_280 Hb_000856_280 Hb_005210_010--Hb_000856_280 Hb_006970_030 Hb_006970_030 Hb_005210_010--Hb_006970_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.068084 1.56612 32.2026 15.349 0.0232491 0.0585461
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.565155 0.867053 0.419025 1.26757 63.7543

CAGE analysis