Hb_000391_060

Information

Type -
Description -
Location Contig391: 130380-132469
Sequence    

Annotation

kegg
ID egr:104445137
description uncharacterized LOC104445137
nr
ID XP_010057259.1
description PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059C5H7
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02343 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000391_060 0.0 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
2 Hb_003656_170 0.1146246514 - - PREDICTED: phenylalanine ammonia-lyase-like [Jatropha curcas]
3 Hb_002097_130 0.1183032575 - - tonoplast intrinsic protein [Hevea brasiliensis]
4 Hb_000589_330 0.1246164926 - - kinase, putative [Ricinus communis]
5 Hb_002370_060 0.1301851596 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Populus euphratica]
6 Hb_000116_290 0.1343765674 - - PREDICTED: proton-coupled amino acid transporter 3 [Jatropha curcas]
7 Hb_003849_200 0.1358514587 - - PREDICTED: BTB/POZ domain-containing protein At1g67900-like isoform X1 [Citrus sinensis]
8 Hb_028841_010 0.136520785 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Jatropha curcas]
9 Hb_033187_020 0.1426217237 - - hypothetical protein CARUB_v10004250mg, partial [Capsella rubella]
10 Hb_000210_160 0.1445531075 - - PREDICTED: protein YLS9-like [Jatropha curcas]
11 Hb_003633_150 0.1449135466 - - hypothetical protein JCGZ_23296 [Jatropha curcas]
12 Hb_082870_010 0.1479124395 - - Disease resistance protein RFL1, putative [Ricinus communis]
13 Hb_000976_340 0.1496368713 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
14 Hb_000054_140 0.1509825732 - - PREDICTED: MACPF domain-containing protein CAD1 [Jatropha curcas]
15 Hb_006573_280 0.1511313351 - - PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]
16 Hb_001247_160 0.1518278833 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
17 Hb_000567_110 0.1521629583 - - hypothetical protein JCGZ_21556 [Jatropha curcas]
18 Hb_003435_040 0.1531226883 - - tonoplast intrinsic protein [Hevea brasiliensis]
19 Hb_002375_080 0.1533761249 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001405_060 0.1534071697 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 4-like [Jatropha curcas]

Gene co-expression network

sample Hb_000391_060 Hb_000391_060 Hb_003656_170 Hb_003656_170 Hb_000391_060--Hb_003656_170 Hb_002097_130 Hb_002097_130 Hb_000391_060--Hb_002097_130 Hb_000589_330 Hb_000589_330 Hb_000391_060--Hb_000589_330 Hb_002370_060 Hb_002370_060 Hb_000391_060--Hb_002370_060 Hb_000116_290 Hb_000116_290 Hb_000391_060--Hb_000116_290 Hb_003849_200 Hb_003849_200 Hb_000391_060--Hb_003849_200 Hb_001123_170 Hb_001123_170 Hb_003656_170--Hb_001123_170 Hb_002324_050 Hb_002324_050 Hb_003656_170--Hb_002324_050 Hb_002078_250 Hb_002078_250 Hb_003656_170--Hb_002078_250 Hb_003964_010 Hb_003964_010 Hb_003656_170--Hb_003964_010 Hb_004306_140 Hb_004306_140 Hb_003656_170--Hb_004306_140 Hb_050236_010 Hb_050236_010 Hb_003656_170--Hb_050236_010 Hb_028928_020 Hb_028928_020 Hb_002097_130--Hb_028928_020 Hb_033187_020 Hb_033187_020 Hb_002097_130--Hb_033187_020 Hb_002097_130--Hb_000589_330 Hb_002097_130--Hb_003849_200 Hb_003435_040 Hb_003435_040 Hb_002097_130--Hb_003435_040 Hb_001013_050 Hb_001013_050 Hb_002097_130--Hb_001013_050 Hb_000589_330--Hb_001013_050 Hb_007007_090 Hb_007007_090 Hb_000589_330--Hb_007007_090 Hb_001913_030 Hb_001913_030 Hb_000589_330--Hb_001913_030 Hb_003835_030 Hb_003835_030 Hb_000589_330--Hb_003835_030 Hb_001269_530 Hb_001269_530 Hb_000589_330--Hb_001269_530 Hb_000054_140 Hb_000054_140 Hb_002370_060--Hb_000054_140 Hb_177215_020 Hb_177215_020 Hb_002370_060--Hb_177215_020 Hb_000836_220 Hb_000836_220 Hb_002370_060--Hb_000836_220 Hb_001248_170 Hb_001248_170 Hb_002370_060--Hb_001248_170 Hb_006573_280 Hb_006573_280 Hb_002370_060--Hb_006573_280 Hb_001198_160 Hb_001198_160 Hb_002370_060--Hb_001198_160 Hb_000976_340 Hb_000976_340 Hb_000116_290--Hb_000976_340 Hb_000094_010 Hb_000094_010 Hb_000116_290--Hb_000094_010 Hb_000116_290--Hb_000589_330 Hb_000116_290--Hb_050236_010 Hb_000116_290--Hb_001248_170 Hb_004282_040 Hb_004282_040 Hb_000116_290--Hb_004282_040 Hb_001013_080 Hb_001013_080 Hb_003849_200--Hb_001013_080 Hb_001048_070 Hb_001048_070 Hb_003849_200--Hb_001048_070 Hb_008725_020 Hb_008725_020 Hb_003849_200--Hb_008725_020 Hb_003849_200--Hb_003435_040 Hb_000210_160 Hb_000210_160 Hb_003849_200--Hb_000210_160 Hb_004634_030 Hb_004634_030 Hb_003849_200--Hb_004634_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0207408 0.942751 0.462092 0.722873 0.0311569 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0351374 0.236243 0.234931

CAGE analysis