Hb_000392_060

Information

Type -
Description -
Location Contig392: 43210-43497
Sequence    

Annotation

kegg
ID rcu:RCOM_1472270
description hypothetical protein
nr
ID KDP31253.1
description hypothetical protein JCGZ_11629 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K8D8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11629 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000392_060 0.0 - - hypothetical protein JCGZ_11629 [Jatropha curcas]
2 Hb_141096_010 0.1384648602 - - PREDICTED: zinc finger CCCH domain-containing protein 55-like [Jatropha curcas]
3 Hb_011081_010 0.1384989421 - - unnamed protein product [Coffea canephora]
4 Hb_000313_080 0.1409560355 rubber biosynthesis Gene Name: CPT3 cis-prenyltransferase 3 [Hevea brasiliensis]
5 Hb_146255_010 0.1470501928 - - PREDICTED: uncharacterized protein LOC105643649 [Jatropha curcas]
6 Hb_133926_010 0.1511908566 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
7 Hb_015978_020 0.1573183996 - - Multidrug resistance protein ABC transporter family protein, putative [Theobroma cacao]
8 Hb_001887_010 0.1609849169 - - mta/sah nucleosidase, putative [Ricinus communis]
9 Hb_003765_010 0.1619508129 - - berberine bridge enzyme [Hevea brasiliensis]
10 Hb_011169_010 0.1653798159 - - mta/sah nucleosidase, putative [Ricinus communis]
11 Hb_001616_010 0.1656036002 - - hypothetical protein RCOM_1749890 [Ricinus communis]
12 Hb_103468_010 0.166649188 - - protein binding protein, putative [Ricinus communis]
13 Hb_005291_020 0.1675165893 - - conserved hypothetical protein [Ricinus communis]
14 Hb_014834_100 0.1678691669 - - PREDICTED: probable aquaporin TIP-type [Gossypium raimondii]
15 Hb_005357_170 0.1701587615 - - Pectinesterase precursor, putative [Ricinus communis]
16 Hb_001557_030 0.1701698174 - - hypothetical protein CICLE_v10005306mg [Citrus clementina]
17 Hb_000614_300 0.1707101142 - - PREDICTED: BAHD acyltransferase At5g47980-like [Jatropha curcas]
18 Hb_003685_070 0.1721523591 - - RecName: Full=(S)-hydroxynitrile lyase; AltName: Full=(S)-acetone-cyanohydrin lyase; AltName: Full=Oxynitrilase [Hevea brasiliensis]
19 Hb_001433_230 0.1729958233 - - PREDICTED: kinesin-4-like [Jatropha curcas]
20 Hb_002020_010 0.1751700038 - - kinase-like protein [Corylus avellana]

Gene co-expression network

sample Hb_000392_060 Hb_000392_060 Hb_141096_010 Hb_141096_010 Hb_000392_060--Hb_141096_010 Hb_011081_010 Hb_011081_010 Hb_000392_060--Hb_011081_010 Hb_000313_080 Hb_000313_080 Hb_000392_060--Hb_000313_080 Hb_146255_010 Hb_146255_010 Hb_000392_060--Hb_146255_010 Hb_133926_010 Hb_133926_010 Hb_000392_060--Hb_133926_010 Hb_015978_020 Hb_015978_020 Hb_000392_060--Hb_015978_020 Hb_141096_010--Hb_011081_010 Hb_141096_010--Hb_133926_010 Hb_103468_010 Hb_103468_010 Hb_141096_010--Hb_103468_010 Hb_001557_030 Hb_001557_030 Hb_141096_010--Hb_001557_030 Hb_014834_100 Hb_014834_100 Hb_141096_010--Hb_014834_100 Hb_003152_010 Hb_003152_010 Hb_141096_010--Hb_003152_010 Hb_011081_010--Hb_133926_010 Hb_011081_010--Hb_103468_010 Hb_011081_010--Hb_014834_100 Hb_180518_010 Hb_180518_010 Hb_011081_010--Hb_180518_010 Hb_011081_010--Hb_001557_030 Hb_000313_080--Hb_146255_010 Hb_003685_070 Hb_003685_070 Hb_000313_080--Hb_003685_070 Hb_005357_170 Hb_005357_170 Hb_000313_080--Hb_005357_170 Hb_001887_010 Hb_001887_010 Hb_000313_080--Hb_001887_010 Hb_006061_030 Hb_006061_030 Hb_000313_080--Hb_006061_030 Hb_000313_080--Hb_015978_020 Hb_002374_540 Hb_002374_540 Hb_146255_010--Hb_002374_540 Hb_146255_010--Hb_001887_010 Hb_146255_010--Hb_003685_070 Hb_146255_010--Hb_006061_030 Hb_133926_010--Hb_180518_010 Hb_133926_010--Hb_103468_010 Hb_027577_010 Hb_027577_010 Hb_133926_010--Hb_027577_010 Hb_000868_020 Hb_000868_020 Hb_133926_010--Hb_000868_020 Hb_003680_240 Hb_003680_240 Hb_015978_020--Hb_003680_240 Hb_015978_020--Hb_003685_070 Hb_015978_020--Hb_014834_100 Hb_140627_040 Hb_140627_040 Hb_015978_020--Hb_140627_040 Hb_001433_230 Hb_001433_230 Hb_015978_020--Hb_001433_230 Hb_015978_020--Hb_005357_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.175987 0 0.31499 3.79469 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.152738 0.494049

CAGE analysis