Hb_000392_430

Information

Type -
Description -
Location Contig392: 356017-357579
Sequence    

Annotation

kegg
ID rcu:RCOM_1513930
description hypothetical protein
nr
ID XP_012080219.1
description PREDICTED: uncharacterized protein LOC105640501 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K550
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11593 PE=4 SV=1
Gene Ontology
ID GO:0005730
description PREDICTED: uncharacterized protein LOC105640501

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000392_430 0.0 - - PREDICTED: uncharacterized protein LOC105640501 [Jatropha curcas]
2 Hb_000111_320 0.0439619372 transcription factor TF Family: bZIP Transcription factor HBP-1b(c1), putative [Ricinus communis]
3 Hb_001314_050 0.0480784089 - - PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Jatropha curcas]
4 Hb_001671_100 0.0624558463 - - glycine-rich RNA-binding family protein [Populus trichocarpa]
5 Hb_002811_180 0.065607184 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000948_160 0.0678159579 - - PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Jatropha curcas]
7 Hb_000466_140 0.0684493074 - - hypothetical protein JCGZ_02122 [Jatropha curcas]
8 Hb_000078_120 0.0697701752 - - PREDICTED: BRCA1-associated protein [Jatropha curcas]
9 Hb_006831_140 0.0698462636 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
10 Hb_001876_050 0.0716377436 - - hypothetical protein JCGZ_01286 [Jatropha curcas]
11 Hb_007416_120 0.075467673 - - arginine/serine-rich splicing factor, putative [Ricinus communis]
12 Hb_000749_190 0.0759705339 - - PREDICTED: nucleolar GTP-binding protein 2 [Populus euphratica]
13 Hb_002232_360 0.0764551376 - - PREDICTED: proline iminopeptidase isoform X2 [Jatropha curcas]
14 Hb_001348_020 0.076990016 - - PREDICTED: uncharacterized protein LOC105638926 isoform X2 [Jatropha curcas]
15 Hb_023001_040 0.077407247 - - Metallopeptidase M24 family protein isoform 1 [Theobroma cacao]
16 Hb_001247_310 0.0776087392 transcription factor TF Family: C2H2 hypothetical protein POPTR_0005s00450g [Populus trichocarpa]
17 Hb_000329_800 0.0778558233 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004319_080 0.0779907652 - - PREDICTED: GPI ethanolamine phosphate transferase 1 [Jatropha curcas]
19 Hb_001301_150 0.0792124732 - - PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera]
20 Hb_001999_310 0.0794756756 - - PREDICTED: lysosomal beta glucosidase-like [Jatropha curcas]

Gene co-expression network

sample Hb_000392_430 Hb_000392_430 Hb_000111_320 Hb_000111_320 Hb_000392_430--Hb_000111_320 Hb_001314_050 Hb_001314_050 Hb_000392_430--Hb_001314_050 Hb_001671_100 Hb_001671_100 Hb_000392_430--Hb_001671_100 Hb_002811_180 Hb_002811_180 Hb_000392_430--Hb_002811_180 Hb_000948_160 Hb_000948_160 Hb_000392_430--Hb_000948_160 Hb_000466_140 Hb_000466_140 Hb_000392_430--Hb_000466_140 Hb_000111_320--Hb_000466_140 Hb_000111_320--Hb_001314_050 Hb_001247_310 Hb_001247_310 Hb_000111_320--Hb_001247_310 Hb_000138_100 Hb_000138_100 Hb_000111_320--Hb_000138_100 Hb_000111_320--Hb_002811_180 Hb_031862_100 Hb_031862_100 Hb_001314_050--Hb_031862_100 Hb_001314_050--Hb_001671_100 Hb_005914_170 Hb_005914_170 Hb_001314_050--Hb_005914_170 Hb_001189_070 Hb_001189_070 Hb_001314_050--Hb_001189_070 Hb_007416_120 Hb_007416_120 Hb_001671_100--Hb_007416_120 Hb_001876_050 Hb_001876_050 Hb_001671_100--Hb_001876_050 Hb_001999_310 Hb_001999_310 Hb_001671_100--Hb_001999_310 Hb_002232_360 Hb_002232_360 Hb_001671_100--Hb_002232_360 Hb_003750_050 Hb_003750_050 Hb_002811_180--Hb_003750_050 Hb_000260_330 Hb_000260_330 Hb_002811_180--Hb_000260_330 Hb_000621_010 Hb_000621_010 Hb_002811_180--Hb_000621_010 Hb_008847_030 Hb_008847_030 Hb_002811_180--Hb_008847_030 Hb_000431_170 Hb_000431_170 Hb_000948_160--Hb_000431_170 Hb_001386_040 Hb_001386_040 Hb_000948_160--Hb_001386_040 Hb_189216_020 Hb_189216_020 Hb_000948_160--Hb_189216_020 Hb_001599_040 Hb_001599_040 Hb_000948_160--Hb_001599_040 Hb_002994_030 Hb_002994_030 Hb_000948_160--Hb_002994_030 Hb_000078_120 Hb_000078_120 Hb_000948_160--Hb_000078_120 Hb_000466_140--Hb_001247_310 Hb_000749_190 Hb_000749_190 Hb_000466_140--Hb_000749_190 Hb_000466_140--Hb_002811_180 Hb_003847_130 Hb_003847_130 Hb_000466_140--Hb_003847_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.37134 3.51291 4.33307 6.45948 4.61204 5.8993
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.48389 7.2834 3.95772 8.44973 5.37464

CAGE analysis