Hb_000395_040

Information

Type -
Description -
Location Contig395: 68046-68852
Sequence    

Annotation

kegg
ID pxb:103949307
description uncharacterized LOC103949307
nr
ID XP_012086598.1
description PREDICTED: uncharacterized protein LOC105645576 [Jatropha curcas]
swissprot
ID Q8GUH2
description Uncharacterized protein At1g01500 OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=1
trembl
ID A0A067JQX4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20354 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39500: 67514-68658
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000395_040 0.0 - - PREDICTED: uncharacterized protein LOC105645576 [Jatropha curcas]
2 Hb_001691_040 0.0910572666 - - PREDICTED: uncharacterized protein LOC105649546 isoform X2 [Jatropha curcas]
3 Hb_005535_080 0.0948534256 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
4 Hb_000815_240 0.095709686 - - PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
5 Hb_005381_020 0.0989167397 - - PREDICTED: uncharacterized protein LOC105630417 [Jatropha curcas]
6 Hb_000523_030 0.0996943702 - - PREDICTED: uncharacterized protein LOC105643073 [Jatropha curcas]
7 Hb_000890_030 0.1031814474 - - plastid CUL1 [Hevea brasiliensis]
8 Hb_002869_050 0.1060297802 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
9 Hb_023344_150 0.1068521803 - - PREDICTED: uncharacterized protein LOC105644462 [Jatropha curcas]
10 Hb_004987_020 0.1075587447 - - -
11 Hb_001328_080 0.1104473399 - - PREDICTED: importin subunit alpha-1b [Jatropha curcas]
12 Hb_000258_420 0.1120048832 - - sucrose transporter 2A [Hevea brasiliensis]
13 Hb_000991_040 0.1129536257 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
14 Hb_000203_270 0.1143964105 - - alpha-xylosidase, putative [Ricinus communis]
15 Hb_002615_070 0.1167286384 - - PREDICTED: uncharacterized protein LOC105628992 isoform X1 [Jatropha curcas]
16 Hb_000805_210 0.1176025332 - - PREDICTED: oxysterol-binding protein-related protein 3C-like [Jatropha curcas]
17 Hb_007919_110 0.1198973045 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
18 Hb_000120_810 0.1206022679 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
19 Hb_003209_130 0.1211378868 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
20 Hb_000390_250 0.1214686831 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000395_040 Hb_000395_040 Hb_001691_040 Hb_001691_040 Hb_000395_040--Hb_001691_040 Hb_005535_080 Hb_005535_080 Hb_000395_040--Hb_005535_080 Hb_000815_240 Hb_000815_240 Hb_000395_040--Hb_000815_240 Hb_005381_020 Hb_005381_020 Hb_000395_040--Hb_005381_020 Hb_000523_030 Hb_000523_030 Hb_000395_040--Hb_000523_030 Hb_000890_030 Hb_000890_030 Hb_000395_040--Hb_000890_030 Hb_003975_010 Hb_003975_010 Hb_001691_040--Hb_003975_010 Hb_002272_240 Hb_002272_240 Hb_001691_040--Hb_002272_240 Hb_000912_100 Hb_000912_100 Hb_001691_040--Hb_000912_100 Hb_001754_020 Hb_001754_020 Hb_001691_040--Hb_001754_020 Hb_002876_210 Hb_002876_210 Hb_001691_040--Hb_002876_210 Hb_003209_130 Hb_003209_130 Hb_005535_080--Hb_003209_130 Hb_005535_080--Hb_005381_020 Hb_002486_050 Hb_002486_050 Hb_005535_080--Hb_002486_050 Hb_000622_110 Hb_000622_110 Hb_005535_080--Hb_000622_110 Hb_007919_110 Hb_007919_110 Hb_005535_080--Hb_007919_110 Hb_000390_250 Hb_000390_250 Hb_000815_240--Hb_000390_250 Hb_000991_040 Hb_000991_040 Hb_000815_240--Hb_000991_040 Hb_005015_080 Hb_005015_080 Hb_000815_240--Hb_005015_080 Hb_000329_230 Hb_000329_230 Hb_000815_240--Hb_000329_230 Hb_084490_010 Hb_084490_010 Hb_000815_240--Hb_084490_010 Hb_000046_570 Hb_000046_570 Hb_005381_020--Hb_000046_570 Hb_007062_040 Hb_007062_040 Hb_005381_020--Hb_007062_040 Hb_005381_020--Hb_000390_250 Hb_000635_040 Hb_000635_040 Hb_005381_020--Hb_000635_040 Hb_001366_090 Hb_001366_090 Hb_005381_020--Hb_001366_090 Hb_002311_380 Hb_002311_380 Hb_005381_020--Hb_002311_380 Hb_003777_130 Hb_003777_130 Hb_000523_030--Hb_003777_130 Hb_000671_030 Hb_000671_030 Hb_000523_030--Hb_000671_030 Hb_000203_270 Hb_000203_270 Hb_000523_030--Hb_000203_270 Hb_000608_280 Hb_000608_280 Hb_000523_030--Hb_000608_280 Hb_000258_420 Hb_000258_420 Hb_000523_030--Hb_000258_420 Hb_000580_030 Hb_000580_030 Hb_000890_030--Hb_000580_030 Hb_012760_030 Hb_012760_030 Hb_000890_030--Hb_012760_030 Hb_016461_020 Hb_016461_020 Hb_000890_030--Hb_016461_020 Hb_000098_050 Hb_000098_050 Hb_000890_030--Hb_000098_050 Hb_044486_020 Hb_044486_020 Hb_000890_030--Hb_044486_020 Hb_000805_210 Hb_000805_210 Hb_000890_030--Hb_000805_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.25945 17.7885 14.7505 25.7144 4.74714 7.14223
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.13613 8.96997 5.98265 7.17432 7.58807

CAGE analysis