Hb_000395_070

Information

Type -
Description -
Location Contig395: 105741-115826
Sequence    

Annotation

kegg
ID rcu:RCOM_1313140
description serine/threonine protein kinase, putative (EC:2.7.12.2)
nr
ID XP_012086596.1
description PREDICTED: serine/threonine-protein kinase BLUS1 isoform X2 [Jatropha curcas]
swissprot
ID Q551H4
description Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1
trembl
ID A0A067JMU0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20353 PE=4 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase blus1-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39501: 105912-110493 , PASA_asmbl_39502: 112156-115524 , PASA_asmbl_39503: 110497-115523
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000395_070 0.0 - - PREDICTED: serine/threonine-protein kinase BLUS1 isoform X2 [Jatropha curcas]
2 Hb_012395_140 0.0454003046 - - PREDICTED: uncharacterized protein LOC105638411 [Jatropha curcas]
3 Hb_000740_100 0.0519304767 - - calpain, putative [Ricinus communis]
4 Hb_003060_060 0.0522740693 - - PREDICTED: protein transport protein SEC31 homolog B [Jatropha curcas]
5 Hb_000412_010 0.0542768079 - - hect ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_002815_030 0.0543402931 - - hypothetical protein CISIN_1g0095162mg, partial [Citrus sinensis]
7 Hb_000579_230 0.055257481 - - PREDICTED: bifunctional nuclease 1 [Jatropha curcas]
8 Hb_001550_060 0.0589197442 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X4 [Jatropha curcas]
9 Hb_002329_040 0.0590006438 - - PREDICTED: uncharacterized protein LOC105648065 [Jatropha curcas]
10 Hb_001754_040 0.060309294 transcription factor TF Family: TRAF PREDICTED: uncharacterized protein LOC105643434 [Jatropha curcas]
11 Hb_001343_040 0.0620426129 - - PREDICTED: uncharacterized protein LOC105638555 [Jatropha curcas]
12 Hb_005402_040 0.0626589354 - - PREDICTED: replication factor C subunit 1 [Jatropha curcas]
13 Hb_008024_030 0.0648588025 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105648348 [Jatropha curcas]
14 Hb_004676_010 0.0663989121 - - PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Jatropha curcas]
15 Hb_001814_030 0.0674587425 - - PREDICTED: uncharacterized protein LOC105650634 [Jatropha curcas]
16 Hb_009615_170 0.0680665343 - - PREDICTED: sphingoid long-chain bases kinase 1 isoform X1 [Jatropha curcas]
17 Hb_002784_110 0.0687137943 - - PREDICTED: E3 ubiquitin-protein ligase KEG [Jatropha curcas]
18 Hb_009270_020 0.0691092713 - - PREDICTED: LOW QUALITY PROTEIN: helicase and polymerase-containing protein TEBICHI [Jatropha curcas]
19 Hb_004182_050 0.0694513245 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X2 [Jatropha curcas]
20 Hb_001062_010 0.0700924547 - - PREDICTED: CWF19-like protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000395_070 Hb_000395_070 Hb_012395_140 Hb_012395_140 Hb_000395_070--Hb_012395_140 Hb_000740_100 Hb_000740_100 Hb_000395_070--Hb_000740_100 Hb_003060_060 Hb_003060_060 Hb_000395_070--Hb_003060_060 Hb_000412_010 Hb_000412_010 Hb_000395_070--Hb_000412_010 Hb_002815_030 Hb_002815_030 Hb_000395_070--Hb_002815_030 Hb_000579_230 Hb_000579_230 Hb_000395_070--Hb_000579_230 Hb_001550_060 Hb_001550_060 Hb_012395_140--Hb_001550_060 Hb_012395_140--Hb_000579_230 Hb_002329_040 Hb_002329_040 Hb_012395_140--Hb_002329_040 Hb_012395_140--Hb_002815_030 Hb_001814_030 Hb_001814_030 Hb_012395_140--Hb_001814_030 Hb_000740_100--Hb_002329_040 Hb_000261_030 Hb_000261_030 Hb_000740_100--Hb_000261_030 Hb_008024_030 Hb_008024_030 Hb_000740_100--Hb_008024_030 Hb_011173_030 Hb_011173_030 Hb_000740_100--Hb_011173_030 Hb_104061_020 Hb_104061_020 Hb_000740_100--Hb_104061_020 Hb_003060_060--Hb_000412_010 Hb_000230_260 Hb_000230_260 Hb_003060_060--Hb_000230_260 Hb_001529_040 Hb_001529_040 Hb_003060_060--Hb_001529_040 Hb_085781_020 Hb_085781_020 Hb_003060_060--Hb_085781_020 Hb_041327_010 Hb_041327_010 Hb_003060_060--Hb_041327_010 Hb_159558_010 Hb_159558_010 Hb_000412_010--Hb_159558_010 Hb_000412_010--Hb_001550_060 Hb_001628_070 Hb_001628_070 Hb_000412_010--Hb_001628_070 Hb_000412_010--Hb_000230_260 Hb_001343_040 Hb_001343_040 Hb_002815_030--Hb_001343_040 Hb_000008_290 Hb_000008_290 Hb_002815_030--Hb_000008_290 Hb_002815_030--Hb_000579_230 Hb_000592_030 Hb_000592_030 Hb_002815_030--Hb_000592_030 Hb_000579_230--Hb_104061_020 Hb_009270_020 Hb_009270_020 Hb_000579_230--Hb_009270_020 Hb_004676_010 Hb_004676_010 Hb_000579_230--Hb_004676_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.7069 19.7317 11.0732 13.3166 20.094 19.283
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0991 7.18486 14.6109 22.3085 17.8255

CAGE analysis