Hb_000395_130

Information

Type -
Description -
Location Contig395: 143018-148509
Sequence    

Annotation

kegg
ID rcu:RCOM_1312970
description N6-adenosine-methyltransferase 70 kDa subunit, putative (EC:2.1.1.62)
nr
ID XP_012086642.1
description PREDICTED: N6-adenosine-methyltransferase MT-A70-like [Jatropha curcas]
swissprot
ID O82486
description N6-adenosine-methyltransferase MT-A70-like OS=Arabidopsis thaliana GN=MTA PE=1 SV=2
trembl
ID A0A067JN06
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20388 PE=4 SV=1
Gene Ontology
ID GO:0009507
description n6-adenosine-methyltransferase mt-a70-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39512: 143149-148470
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000395_130 0.0 - - PREDICTED: N6-adenosine-methyltransferase MT-A70-like [Jatropha curcas]
2 Hb_000092_020 0.0495089099 transcription factor TF Family: MYB transcription factor, putative [Ricinus communis]
3 Hb_001080_230 0.0524446809 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105649979 [Jatropha curcas]
4 Hb_000003_190 0.0589744518 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like isoform X1 [Nelumbo nucifera]
5 Hb_000441_120 0.0602347128 - - PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_006420_040 0.0614303268 transcription factor TF Family: Orphans PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X2 [Jatropha curcas]
7 Hb_012779_090 0.0615376102 - - PREDICTED: lipase member N [Jatropha curcas]
8 Hb_003785_040 0.0620180047 - - PREDICTED: R3H domain-containing protein 2-like isoform X1 [Jatropha curcas]
9 Hb_000035_290 0.0620632569 - - RNA recognition motif-containing family protein [Populus trichocarpa]
10 Hb_001638_270 0.0621282601 - - PREDICTED: vacuolar protein sorting-associated protein 8 homolog isoform X2 [Jatropha curcas]
11 Hb_167498_010 0.0624378214 - - PREDICTED: WPP domain-interacting protein 1-like [Jatropha curcas]
12 Hb_017862_020 0.0646041723 - - PREDICTED: probable inactive serine/threonine-protein kinase lvsG [Jatropha curcas]
13 Hb_162275_050 0.0647164373 - - PREDICTED: mRNA-capping enzyme [Jatropha curcas]
14 Hb_007254_070 0.0654217549 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Jatropha curcas]
15 Hb_012194_030 0.0664569733 - - PREDICTED: R3H domain-containing protein 2-like isoform X1 [Jatropha curcas]
16 Hb_011491_010 0.0665602036 - - Protein YME1, putative [Ricinus communis]
17 Hb_001550_060 0.067409161 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X4 [Jatropha curcas]
18 Hb_003470_080 0.0676128693 transcription factor TF Family: SNF2 PREDICTED: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1 [Jatropha curcas]
19 Hb_007163_120 0.0680539282 - - PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas]
20 Hb_003206_130 0.0689660794 - - PREDICTED: protein NRDE2 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000395_130 Hb_000395_130 Hb_000092_020 Hb_000092_020 Hb_000395_130--Hb_000092_020 Hb_001080_230 Hb_001080_230 Hb_000395_130--Hb_001080_230 Hb_000003_190 Hb_000003_190 Hb_000395_130--Hb_000003_190 Hb_000441_120 Hb_000441_120 Hb_000395_130--Hb_000441_120 Hb_006420_040 Hb_006420_040 Hb_000395_130--Hb_006420_040 Hb_012779_090 Hb_012779_090 Hb_000395_130--Hb_012779_090 Hb_000092_020--Hb_001080_230 Hb_000092_020--Hb_000003_190 Hb_003785_040 Hb_003785_040 Hb_000092_020--Hb_003785_040 Hb_000574_540 Hb_000574_540 Hb_000092_020--Hb_000574_540 Hb_011491_010 Hb_011491_010 Hb_000092_020--Hb_011491_010 Hb_001080_230--Hb_000003_190 Hb_003470_080 Hb_003470_080 Hb_001080_230--Hb_003470_080 Hb_002872_040 Hb_002872_040 Hb_001080_230--Hb_002872_040 Hb_003030_060 Hb_003030_060 Hb_001080_230--Hb_003030_060 Hb_000003_190--Hb_003470_080 Hb_000003_190--Hb_002872_040 Hb_008959_020 Hb_008959_020 Hb_000003_190--Hb_008959_020 Hb_000441_120--Hb_006420_040 Hb_000165_040 Hb_000165_040 Hb_000441_120--Hb_000165_040 Hb_003206_130 Hb_003206_130 Hb_000441_120--Hb_003206_130 Hb_000207_180 Hb_000207_180 Hb_000441_120--Hb_000207_180 Hb_009270_020 Hb_009270_020 Hb_000441_120--Hb_009270_020 Hb_001550_060 Hb_001550_060 Hb_006420_040--Hb_001550_060 Hb_000671_070 Hb_000671_070 Hb_006420_040--Hb_000671_070 Hb_000025_320 Hb_000025_320 Hb_006420_040--Hb_000025_320 Hb_006420_040--Hb_003206_130 Hb_009503_030 Hb_009503_030 Hb_006420_040--Hb_009503_030 Hb_162275_050 Hb_162275_050 Hb_012779_090--Hb_162275_050 Hb_002798_070 Hb_002798_070 Hb_012779_090--Hb_002798_070 Hb_000243_250 Hb_000243_250 Hb_012779_090--Hb_000243_250 Hb_012194_030 Hb_012194_030 Hb_012779_090--Hb_012194_030 Hb_001410_020 Hb_001410_020 Hb_012779_090--Hb_001410_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.3594 17.2593 9.27462 7.09957 14.298 14.0782
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.2152 11.7018 10.9823 12.2484 10.7331

CAGE analysis