Hb_000398_130

Information

Type -
Description -
Location Contig398: 207512-208084
Sequence    

Annotation

kegg
ID rcu:RCOM_0977820
description heat-shock protein, putative
nr
ID XP_012069131.1
description PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
swissprot
ID P19244
description 22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1
trembl
ID A0A067KXM4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24896 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000398_130 0.0 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
2 Hb_006745_020 0.178891125 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
3 Hb_003647_120 0.1792959684 - - 18.2 kDa class I heat shock family protein [Populus trichocarpa]
4 Hb_000488_030 0.2048190539 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
5 Hb_005730_100 0.207503787 - - PREDICTED: 18.2 kDa class I heat shock protein-like [Gossypium raimondii]
6 Hb_001279_230 0.2196966699 - - PREDICTED: class I heat shock protein-like [Jatropha curcas]
7 Hb_027255_010 0.2295536101 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]
8 Hb_001723_110 0.2331862881 - - PREDICTED: solute carrier family 25 member 44-like isoform X2 [Malus domestica]
9 Hb_001104_040 0.2356596587 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
10 Hb_003337_070 0.2366791255 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
11 Hb_000853_290 0.239274822 - - PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
12 Hb_000796_060 0.2513296577 - - Glycogenin-2 [Aegilops tauschii]
13 Hb_009686_010 0.2549692946 - - mitochondrial thioredoxin 2 [Hevea brasiliensis]
14 Hb_048207_010 0.2575728184 - - heat-shock protein, putative [Ricinus communis]
15 Hb_000205_070 0.2643114348 - - kinase, putative [Ricinus communis]
16 Hb_184326_010 0.2653692758 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
17 Hb_182807_020 0.2691223001 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
18 Hb_000891_080 0.2719305383 - - PREDICTED: TMV resistance protein N-like, partial [Populus euphratica]
19 Hb_002374_560 0.272493434 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH11-like [Populus euphratica]
20 Hb_002890_190 0.2753684985 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]

Gene co-expression network

sample Hb_000398_130 Hb_000398_130 Hb_006745_020 Hb_006745_020 Hb_000398_130--Hb_006745_020 Hb_003647_120 Hb_003647_120 Hb_000398_130--Hb_003647_120 Hb_000488_030 Hb_000488_030 Hb_000398_130--Hb_000488_030 Hb_005730_100 Hb_005730_100 Hb_000398_130--Hb_005730_100 Hb_001279_230 Hb_001279_230 Hb_000398_130--Hb_001279_230 Hb_027255_010 Hb_027255_010 Hb_000398_130--Hb_027255_010 Hb_003337_070 Hb_003337_070 Hb_006745_020--Hb_003337_070 Hb_000853_290 Hb_000853_290 Hb_006745_020--Hb_000853_290 Hb_000205_070 Hb_000205_070 Hb_006745_020--Hb_000205_070 Hb_184326_010 Hb_184326_010 Hb_006745_020--Hb_184326_010 Hb_006745_020--Hb_003647_120 Hb_003647_120--Hb_001279_230 Hb_001723_110 Hb_001723_110 Hb_003647_120--Hb_001723_110 Hb_003647_120--Hb_184326_010 Hb_003647_120--Hb_003337_070 Hb_000488_030--Hb_006745_020 Hb_000488_030--Hb_005730_100 Hb_079297_010 Hb_079297_010 Hb_000488_030--Hb_079297_010 Hb_000046_220 Hb_000046_220 Hb_000488_030--Hb_000046_220 Hb_029980_010 Hb_029980_010 Hb_000488_030--Hb_029980_010 Hb_002890_190 Hb_002890_190 Hb_005730_100--Hb_002890_190 Hb_000891_080 Hb_000891_080 Hb_005730_100--Hb_000891_080 Hb_005730_100--Hb_029980_010 Hb_001104_040 Hb_001104_040 Hb_005730_100--Hb_001104_040 Hb_001279_230--Hb_001104_040 Hb_001279_230--Hb_003337_070 Hb_001279_230--Hb_184326_010 Hb_001279_230--Hb_001723_110 Hb_001279_230--Hb_006745_020 Hb_027255_010--Hb_000205_070 Hb_009686_010 Hb_009686_010 Hb_027255_010--Hb_009686_010 Hb_009189_030 Hb_009189_030 Hb_027255_010--Hb_009189_030 Hb_114868_010 Hb_114868_010 Hb_027255_010--Hb_114868_010 Hb_002326_060 Hb_002326_060 Hb_027255_010--Hb_002326_060 Hb_027255_010--Hb_000853_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.59407 91.2514 1.68122 4.13628 399.024 170.592
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.108219 0.170086 3.39679 0.314791 32.3366

CAGE analysis