Hb_000402_110

Information

Type -
Description -
Location Contig402: 126288-126943
Sequence    

Annotation

kegg
ID rcu:RCOM_0745070
description hypothetical protein
nr
ID KDP26628.1
description hypothetical protein JCGZ_17786 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JUW8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17786 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000402_110 0.0 - - hypothetical protein JCGZ_17786 [Jatropha curcas]
2 Hb_000613_150 0.250901828 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
3 Hb_003124_180 0.2582815239 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_000317_530 0.2944641273 - - hypothetical protein, partial [Pseudomonas fluorescens]
5 Hb_002282_040 0.336298367 - - hypothetical protein VITISV_030841 [Vitis vinifera]
6 Hb_003095_090 0.3492551664 - - hypothetical protein JCGZ_10029 [Jatropha curcas]
7 Hb_003626_010 0.3540095781 - - hypothetical protein JCGZ_07378 [Jatropha curcas]
8 Hb_001332_030 0.3551113516 - - hypothetical protein JCGZ_21111 [Jatropha curcas]
9 Hb_022680_020 0.3563264644 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
10 Hb_001632_030 0.3572282261 - - PREDICTED: chaperone protein ClpB1 [Jatropha curcas]
11 Hb_000890_090 0.3588858877 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
12 Hb_006655_040 0.3607725571 - - tau class glutathione transferase GSTU15 [Populus trichocarpa]
13 Hb_003020_080 0.3644360988 - - -
14 Hb_096224_020 0.3751971963 - - hypothetical protein JCGZ_06980 [Jatropha curcas]
15 Hb_000062_410 0.38167222 - - PREDICTED: uncharacterized protein LOC105644766 [Jatropha curcas]
16 Hb_002791_040 0.3817642162 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
17 Hb_001190_050 0.3843265076 - - hypothetical protein JCGZ_20709 [Jatropha curcas]
18 Hb_002374_500 0.3953615943 - - PREDICTED: putative F-box protein PP2-B12 [Gossypium raimondii]
19 Hb_000031_040 0.3984806087 - - centromere protein O [Medicago truncatula]
20 Hb_007451_080 0.4010640316 transcription factor TF Family: NF-YB ccaat-binding transcription factor subunit A, putative [Ricinus communis]

Gene co-expression network

sample Hb_000402_110 Hb_000402_110 Hb_000613_150 Hb_000613_150 Hb_000402_110--Hb_000613_150 Hb_003124_180 Hb_003124_180 Hb_000402_110--Hb_003124_180 Hb_000317_530 Hb_000317_530 Hb_000402_110--Hb_000317_530 Hb_002282_040 Hb_002282_040 Hb_000402_110--Hb_002282_040 Hb_003095_090 Hb_003095_090 Hb_000402_110--Hb_003095_090 Hb_003626_010 Hb_003626_010 Hb_000402_110--Hb_003626_010 Hb_000613_150--Hb_000317_530 Hb_012163_030 Hb_012163_030 Hb_000613_150--Hb_012163_030 Hb_001632_030 Hb_001632_030 Hb_000613_150--Hb_001632_030 Hb_000613_150--Hb_003124_180 Hb_026740_010 Hb_026740_010 Hb_000613_150--Hb_026740_010 Hb_003124_180--Hb_001632_030 Hb_002701_190 Hb_002701_190 Hb_003124_180--Hb_002701_190 Hb_000890_090 Hb_000890_090 Hb_003124_180--Hb_000890_090 Hb_006655_040 Hb_006655_040 Hb_003124_180--Hb_006655_040 Hb_000062_410 Hb_000062_410 Hb_000317_530--Hb_000062_410 Hb_010422_080 Hb_010422_080 Hb_000317_530--Hb_010422_080 Hb_000317_530--Hb_012163_030 Hb_000031_040 Hb_000031_040 Hb_000317_530--Hb_000031_040 Hb_000487_280 Hb_000487_280 Hb_000317_530--Hb_000487_280 Hb_096224_020 Hb_096224_020 Hb_002282_040--Hb_096224_020 Hb_000693_020 Hb_000693_020 Hb_002282_040--Hb_000693_020 Hb_003209_050 Hb_003209_050 Hb_002282_040--Hb_003209_050 Hb_003020_080 Hb_003020_080 Hb_002282_040--Hb_003020_080 Hb_128051_010 Hb_128051_010 Hb_002282_040--Hb_128051_010 Hb_003322_010 Hb_003322_010 Hb_002282_040--Hb_003322_010 Hb_002374_500 Hb_002374_500 Hb_003095_090--Hb_002374_500 Hb_005316_010 Hb_005316_010 Hb_003095_090--Hb_005316_010 Hb_000022_210 Hb_000022_210 Hb_003095_090--Hb_000022_210 Hb_002671_070 Hb_002671_070 Hb_003095_090--Hb_002671_070 Hb_005946_130 Hb_005946_130 Hb_003095_090--Hb_005946_130 Hb_001048_120 Hb_001048_120 Hb_003095_090--Hb_001048_120 Hb_007451_080 Hb_007451_080 Hb_003626_010--Hb_007451_080 Hb_003626_010--Hb_003095_090 Hb_002791_040 Hb_002791_040 Hb_003626_010--Hb_002791_040 Hb_001190_050 Hb_001190_050 Hb_003626_010--Hb_001190_050 Hb_003626_010--Hb_006655_040 Hb_008014_060 Hb_008014_060 Hb_003626_010--Hb_008014_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.13402 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.53373 1.244 0 2.293 0

CAGE analysis