Hb_000402_180

Information

Type -
Description -
Location Contig402: 177234-177557
Sequence    

Annotation

kegg
ID cit:102611595
description hypothetical protein
nr
ID XP_012085871.1
description PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JRX4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17805 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000402_180 0.0 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
2 Hb_036492_020 0.0717797717 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
3 Hb_134022_010 0.0872620486 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
4 Hb_003929_040 0.0946581575 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
5 Hb_070613_010 0.1040731385 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
6 Hb_001660_130 0.1049783277 - - PREDICTED: serine/threonine-protein kinase-like protein CCR4 [Jatropha curcas]
7 Hb_008810_030 0.1066543144 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
8 Hb_002301_340 0.1096684973 transcription factor TF Family: B3 leafy cotyledon 2 [Ricinus communis]
9 Hb_000656_260 0.1118190744 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
10 Hb_026016_010 0.115562868 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
11 Hb_006358_030 0.1212621413 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
12 Hb_003811_030 0.1233024029 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
13 Hb_012799_040 0.1236850046 - - PREDICTED: transmembrane ascorbate ferrireductase 1 [Jatropha curcas]
14 Hb_002030_100 0.1273138851 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
15 Hb_000156_080 0.1280001327 - - Potassium channel KAT2, putative [Ricinus communis]
16 Hb_004393_030 0.128527868 - - CBL-interacting protein kinase 6 [Populus trichocarpa]
17 Hb_004899_360 0.1299629608 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
18 Hb_002783_130 0.130229752 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]
19 Hb_029584_110 0.1316237363 transcription factor TF Family: MYB-related PREDICTED: myb-like protein J [Jatropha curcas]
20 Hb_004109_150 0.1316968871 - - glutathione-S-transferase tau 1 [Hevea brasiliensis]

Gene co-expression network

sample Hb_000402_180 Hb_000402_180 Hb_036492_020 Hb_036492_020 Hb_000402_180--Hb_036492_020 Hb_134022_010 Hb_134022_010 Hb_000402_180--Hb_134022_010 Hb_003929_040 Hb_003929_040 Hb_000402_180--Hb_003929_040 Hb_070613_010 Hb_070613_010 Hb_000402_180--Hb_070613_010 Hb_001660_130 Hb_001660_130 Hb_000402_180--Hb_001660_130 Hb_008810_030 Hb_008810_030 Hb_000402_180--Hb_008810_030 Hb_006358_030 Hb_006358_030 Hb_036492_020--Hb_006358_030 Hb_000656_260 Hb_000656_260 Hb_036492_020--Hb_000656_260 Hb_036492_020--Hb_134022_010 Hb_036492_020--Hb_003929_040 Hb_152414_010 Hb_152414_010 Hb_036492_020--Hb_152414_010 Hb_004724_300 Hb_004724_300 Hb_134022_010--Hb_004724_300 Hb_134022_010--Hb_008810_030 Hb_001821_050 Hb_001821_050 Hb_134022_010--Hb_001821_050 Hb_004393_030 Hb_004393_030 Hb_134022_010--Hb_004393_030 Hb_003929_040--Hb_006358_030 Hb_003811_030 Hb_003811_030 Hb_003929_040--Hb_003811_030 Hb_003929_040--Hb_070613_010 Hb_003929_040--Hb_134022_010 Hb_002301_340 Hb_002301_340 Hb_070613_010--Hb_002301_340 Hb_002548_020 Hb_002548_020 Hb_070613_010--Hb_002548_020 Hb_070613_010--Hb_134022_010 Hb_002783_130 Hb_002783_130 Hb_070613_010--Hb_002783_130 Hb_002110_050 Hb_002110_050 Hb_070613_010--Hb_002110_050 Hb_001660_130--Hb_002783_130 Hb_001660_130--Hb_004393_030 Hb_021254_020 Hb_021254_020 Hb_001660_130--Hb_021254_020 Hb_001660_130--Hb_008810_030 Hb_012799_040 Hb_012799_040 Hb_001660_130--Hb_012799_040 Hb_008810_030--Hb_004393_030 Hb_008810_030--Hb_021254_020 Hb_004899_360 Hb_004899_360 Hb_008810_030--Hb_004899_360 Hb_000032_090 Hb_000032_090 Hb_008810_030--Hb_000032_090 Hb_004109_240 Hb_004109_240 Hb_008810_030--Hb_004109_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.260473 140.294 94.1182 40.8416 0 0.487043
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.56175 50.7503

CAGE analysis