Hb_000413_220

Information

Type -
Description -
Location Contig413: 165981-171960
Sequence    

Annotation

kegg
ID rcu:RCOM_0906510
description kinesin, putative
nr
ID XP_012091426.1
description PREDICTED: kinesin-1 [Jatropha curcas]
swissprot
ID Q07970
description Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1
trembl
ID A0A067JAN0
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_21293 PE=3 SV=1
Gene Ontology
ID GO:0015630
description kinesin-like protein a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000413_220 0.0 - - PREDICTED: kinesin-1 [Jatropha curcas]
2 Hb_000574_180 0.0411329355 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
3 Hb_000668_190 0.061959961 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
4 Hb_000256_170 0.0790833421 - - PREDICTED: uncharacterized protein LOC105638320 [Jatropha curcas]
5 Hb_000739_250 0.0872688597 - - PREDICTED: uncharacterized protein LOC105120821 [Populus euphratica]
6 Hb_150745_010 0.0961641881 - - hypothetical protein JCGZ_17337 [Jatropha curcas]
7 Hb_001754_100 0.1133500595 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
8 Hb_002534_040 0.1153109761 - - Calmodulin, putative [Ricinus communis]
9 Hb_000574_270 0.1236647384 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
10 Hb_000397_170 0.1293189002 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002486_090 0.1384823869 - - hypothetical protein POPTR_0005s06910g [Populus trichocarpa]
12 Hb_003226_060 0.1415436314 - - Pectinesterase-2 precursor, putative [Ricinus communis]
13 Hb_000164_030 0.1457193174 - - PREDICTED: RING-H2 finger protein ATL14-like [Zea mays]
14 Hb_000340_070 0.1497691605 - - PREDICTED: CSC1-like protein At4g02900 [Jatropha curcas]
15 Hb_005649_070 0.1499068284 - - conserved hypothetical protein [Ricinus communis]
16 Hb_169753_010 0.1513340059 - - hypothetical protein JCGZ_18439 [Jatropha curcas]
17 Hb_048141_060 0.1514416524 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT3 [Populus euphratica]
18 Hb_002435_010 0.1539295017 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
19 Hb_004650_040 0.1555869916 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105638892 [Jatropha curcas]
20 Hb_007101_250 0.1574371757 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000413_220 Hb_000413_220 Hb_000574_180 Hb_000574_180 Hb_000413_220--Hb_000574_180 Hb_000668_190 Hb_000668_190 Hb_000413_220--Hb_000668_190 Hb_000256_170 Hb_000256_170 Hb_000413_220--Hb_000256_170 Hb_000739_250 Hb_000739_250 Hb_000413_220--Hb_000739_250 Hb_150745_010 Hb_150745_010 Hb_000413_220--Hb_150745_010 Hb_001754_100 Hb_001754_100 Hb_000413_220--Hb_001754_100 Hb_000574_180--Hb_000256_170 Hb_000574_180--Hb_000739_250 Hb_000574_180--Hb_000668_190 Hb_000397_170 Hb_000397_170 Hb_000574_180--Hb_000397_170 Hb_000574_180--Hb_001754_100 Hb_002534_040 Hb_002534_040 Hb_000668_190--Hb_002534_040 Hb_000668_190--Hb_000739_250 Hb_000164_030 Hb_000164_030 Hb_000668_190--Hb_000164_030 Hb_002435_010 Hb_002435_010 Hb_000668_190--Hb_002435_010 Hb_000256_170--Hb_000739_250 Hb_000331_020 Hb_000331_020 Hb_000256_170--Hb_000331_020 Hb_000256_170--Hb_000397_170 Hb_000256_170--Hb_000668_190 Hb_002486_090 Hb_002486_090 Hb_000739_250--Hb_002486_090 Hb_005141_020 Hb_005141_020 Hb_000739_250--Hb_005141_020 Hb_150745_010--Hb_001754_100 Hb_150745_010--Hb_000574_180 Hb_000483_050 Hb_000483_050 Hb_150745_010--Hb_000483_050 Hb_150745_010--Hb_000397_170 Hb_000574_270 Hb_000574_270 Hb_150745_010--Hb_000574_270 Hb_001754_100--Hb_000397_170 Hb_003226_060 Hb_003226_060 Hb_001754_100--Hb_003226_060 Hb_001754_100--Hb_000256_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0152646 0.1185 0.0267375 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00657561 0

CAGE analysis