Hb_000413_290

Information

Type -
Description -
Location Contig413: 231621-231848
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000413_290 0.0 - - -
2 Hb_000181_410 0.2750608346 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001300_100 0.2776026301 - - -
4 Hb_010366_010 0.2857694623 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
5 Hb_007333_030 0.288602688 - - -
6 Hb_005656_030 0.2899281515 transcription factor TF Family: MYB-related r2r3-myb transcription factor, putative [Ricinus communis]
7 Hb_000107_470 0.2925874263 - - cellulose synthase, putative [Ricinus communis]
8 Hb_001807_030 0.2954388065 - - PREDICTED: CDT1-like protein b [Jatropha curcas]
9 Hb_007603_020 0.2983216145 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
10 Hb_001767_040 0.2997638422 - - dehydroascorbate reductase, putative [Ricinus communis]
11 Hb_008453_130 0.2998883605 - - hypothetical protein JCGZ_08179 [Jatropha curcas]
12 Hb_004994_130 0.3007408714 transcription factor TF Family: MYB PREDICTED: myb-like protein M [Jatropha curcas]
13 Hb_002929_130 0.3013650627 - - phosphofructokinase [Hevea brasiliensis]
14 Hb_009265_050 0.3024664356 - - PREDICTED: glucosidase 2 subunit beta [Jatropha curcas]
15 Hb_006831_100 0.3056354349 - - snRNA-activating protein complex subunit, putative [Ricinus communis]
16 Hb_017491_070 0.3099519747 - - PREDICTED: dnaJ homolog subfamily B member 6-like isoform X1 [Jatropha curcas]
17 Hb_002232_300 0.3104274827 - - Squalene monooxygenase, putative [Ricinus communis]
18 Hb_000574_360 0.3119793089 - - PREDICTED: formamidopyrimidine-DNA glycosylase-like isoform X1 [Vitis vinifera]
19 Hb_063805_010 0.3127169809 - - -
20 Hb_005568_090 0.3134702302 - - WD-repeat protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000413_290 Hb_000413_290 Hb_000181_410 Hb_000181_410 Hb_000413_290--Hb_000181_410 Hb_001300_100 Hb_001300_100 Hb_000413_290--Hb_001300_100 Hb_010366_010 Hb_010366_010 Hb_000413_290--Hb_010366_010 Hb_007333_030 Hb_007333_030 Hb_000413_290--Hb_007333_030 Hb_005656_030 Hb_005656_030 Hb_000413_290--Hb_005656_030 Hb_000107_470 Hb_000107_470 Hb_000413_290--Hb_000107_470 Hb_000181_410--Hb_000107_470 Hb_007603_020 Hb_007603_020 Hb_000181_410--Hb_007603_020 Hb_004994_130 Hb_004994_130 Hb_000181_410--Hb_004994_130 Hb_000904_130 Hb_000904_130 Hb_000181_410--Hb_000904_130 Hb_000152_510 Hb_000152_510 Hb_000181_410--Hb_000152_510 Hb_163839_010 Hb_163839_010 Hb_000181_410--Hb_163839_010 Hb_063805_010 Hb_063805_010 Hb_001300_100--Hb_063805_010 Hb_058551_010 Hb_058551_010 Hb_001300_100--Hb_058551_010 Hb_027472_210 Hb_027472_210 Hb_001300_100--Hb_027472_210 Hb_002890_150 Hb_002890_150 Hb_001300_100--Hb_002890_150 Hb_013405_150 Hb_013405_150 Hb_001300_100--Hb_013405_150 Hb_002947_040 Hb_002947_040 Hb_001300_100--Hb_002947_040 Hb_000078_090 Hb_000078_090 Hb_010366_010--Hb_000078_090 Hb_000613_230 Hb_000613_230 Hb_010366_010--Hb_000613_230 Hb_001546_160 Hb_001546_160 Hb_010366_010--Hb_001546_160 Hb_003089_030 Hb_003089_030 Hb_010366_010--Hb_003089_030 Hb_005568_090 Hb_005568_090 Hb_010366_010--Hb_005568_090 Hb_104812_010 Hb_104812_010 Hb_007333_030--Hb_104812_010 Hb_001221_140 Hb_001221_140 Hb_007333_030--Hb_001221_140 Hb_000732_170 Hb_000732_170 Hb_007333_030--Hb_000732_170 Hb_003059_010 Hb_003059_010 Hb_007333_030--Hb_003059_010 Hb_000574_360 Hb_000574_360 Hb_007333_030--Hb_000574_360 Hb_000077_220 Hb_000077_220 Hb_007333_030--Hb_000077_220 Hb_003159_100 Hb_003159_100 Hb_005656_030--Hb_003159_100 Hb_005656_030--Hb_000107_470 Hb_001913_020 Hb_001913_020 Hb_005656_030--Hb_001913_020 Hb_005656_030--Hb_000181_410 Hb_010515_030 Hb_010515_030 Hb_005656_030--Hb_010515_030 Hb_000544_160 Hb_000544_160 Hb_000107_470--Hb_000544_160 Hb_000107_470--Hb_004994_130 Hb_004453_100 Hb_004453_100 Hb_000107_470--Hb_004453_100 Hb_006921_040 Hb_006921_040 Hb_000107_470--Hb_006921_040 Hb_000107_470--Hb_007603_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.35916 2.41141 6.56933 0 4.16178 1.34782
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 3.25557 0.643687 0.861083

CAGE analysis