Hb_000414_180

Information

Type -
Description -
Location Contig414: 352687-353182
Sequence    

Annotation

kegg
ID sita:101755102
description cysteine-rich receptor-like protein kinase 40-like
nr
ID XP_010644280.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Vitis vinifera]
swissprot
ID -
description -
trembl
ID M0UW73
description Uncharacterized protein (Fragment) OS=Hordeum vulgare var. distichum PE=4 SV=1
Gene Ontology
ID GO:0016301
description serine threonine-protein kinase pbs1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41014: 352019-354241 , PASA_asmbl_41015: 352019-354241
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000414_180 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Vitis vinifera]
2 Hb_062013_010 0.123816606 - - phosphoprotein phosphatase, putative [Ricinus communis]
3 Hb_005288_060 0.1496228522 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like isoform X1 [Citrus sinensis]
4 Hb_001793_030 0.153026317 - - Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
5 Hb_000329_080 0.1531290333 - - PREDICTED: transketolase, chloroplastic [Jatropha curcas]
6 Hb_001080_150 0.1627196634 - - PREDICTED: Niemann-Pick C1 protein-like [Jatropha curcas]
7 Hb_000454_160 0.165018837 - - amidophosphoribosyltransferase, putative [Ricinus communis]
8 Hb_001811_080 0.1732064831 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
9 Hb_010068_050 0.1750430603 - - PREDICTED: uncharacterized protein LOC105632963 [Jatropha curcas]
10 Hb_006594_080 0.1825192962 - - beta-glucosidase, putative [Ricinus communis]
11 Hb_002759_040 0.1853985219 - - BnaA09g29830D [Brassica napus]
12 Hb_000035_020 0.1872157497 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
13 Hb_182424_020 0.1899168903 - - hypothetical protein POPTR_0006s24190g [Populus trichocarpa]
14 Hb_159308_020 0.1910882887 - - hypothetical protein B456_002G027900 [Gossypium raimondii]
15 Hb_069147_010 0.1911691477 desease resistance Gene Name: zf-BED PREDICTED: probable disease resistance protein At4g27220 isoform X1 [Populus euphratica]
16 Hb_000313_230 0.1959414399 - - PREDICTED: uncharacterized protein LOC105636893 [Jatropha curcas]
17 Hb_182651_020 0.1959750881 - - alcohol dehydrogenase, putative [Ricinus communis]
18 Hb_000997_320 0.196273684 - - PREDICTED: acylamino-acid-releasing enzyme-like [Malus domestica]
19 Hb_000300_680 0.1974012741 - - PREDICTED: uncharacterized protein LOC105632625 isoform X1 [Jatropha curcas]
20 Hb_006483_120 0.1980405117 - - DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000414_180 Hb_000414_180 Hb_062013_010 Hb_062013_010 Hb_000414_180--Hb_062013_010 Hb_005288_060 Hb_005288_060 Hb_000414_180--Hb_005288_060 Hb_001793_030 Hb_001793_030 Hb_000414_180--Hb_001793_030 Hb_000329_080 Hb_000329_080 Hb_000414_180--Hb_000329_080 Hb_001080_150 Hb_001080_150 Hb_000414_180--Hb_001080_150 Hb_000454_160 Hb_000454_160 Hb_000414_180--Hb_000454_160 Hb_062013_010--Hb_000329_080 Hb_062013_010--Hb_001080_150 Hb_000963_090 Hb_000963_090 Hb_062013_010--Hb_000963_090 Hb_001365_010 Hb_001365_010 Hb_062013_010--Hb_001365_010 Hb_182651_020 Hb_182651_020 Hb_062013_010--Hb_182651_020 Hb_006594_080 Hb_006594_080 Hb_005288_060--Hb_006594_080 Hb_000313_230 Hb_000313_230 Hb_005288_060--Hb_000313_230 Hb_000574_250 Hb_000574_250 Hb_005288_060--Hb_000574_250 Hb_010068_050 Hb_010068_050 Hb_005288_060--Hb_010068_050 Hb_002874_030 Hb_002874_030 Hb_005288_060--Hb_002874_030 Hb_007933_030 Hb_007933_030 Hb_001793_030--Hb_007933_030 Hb_168031_020 Hb_168031_020 Hb_001793_030--Hb_168031_020 Hb_078477_060 Hb_078477_060 Hb_001793_030--Hb_078477_060 Hb_001793_030--Hb_001080_150 Hb_001793_030--Hb_000329_080 Hb_000329_080--Hb_001365_010 Hb_000163_110 Hb_000163_110 Hb_000329_080--Hb_000163_110 Hb_001195_370 Hb_001195_370 Hb_000329_080--Hb_001195_370 Hb_000300_680 Hb_000300_680 Hb_000329_080--Hb_000300_680 Hb_001811_080 Hb_001811_080 Hb_000329_080--Hb_001811_080 Hb_000977_150 Hb_000977_150 Hb_000329_080--Hb_000977_150 Hb_001080_150--Hb_001195_370 Hb_001080_150--Hb_000329_080 Hb_001080_150--Hb_007933_030 Hb_001080_150--Hb_000963_090 Hb_001080_150--Hb_078477_060 Hb_012404_080 Hb_012404_080 Hb_000454_160--Hb_012404_080 Hb_011609_210 Hb_011609_210 Hb_000454_160--Hb_011609_210 Hb_018272_050 Hb_018272_050 Hb_000454_160--Hb_018272_050 Hb_000454_160--Hb_000977_150 Hb_002518_180 Hb_002518_180 Hb_000454_160--Hb_002518_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.304925 0.624566 0.612974 2.53087 0.165198 0.323857
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.200239 0.157283 0.50306 3.70842 8.00985

CAGE analysis