Hb_000417_090

Information

Type -
Description -
Location Contig417: 68821-70254
Sequence    

Annotation

kegg
ID rcu:RCOM_1249840
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_002522223.1
description CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
swissprot
ID Q9LWM4
description CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1
trembl
ID B9S8A4
description Non-specific serine/threonine protein kinase OS=Ricinus communis GN=RCOM_1249840 PE=4 SV=1
Gene Ontology
ID GO:0005829
description cbl-interacting protein kinase 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41224: 68837-69087
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000417_090 0.0 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
2 Hb_000072_230 0.0971043358 - - hypothetical protein POPTR_0004s10790g [Populus trichocarpa]
3 Hb_000107_360 0.12216769 - - PREDICTED: xylem cysteine proteinase 1 [Jatropha curcas]
4 Hb_000190_170 0.1352237842 - - PREDICTED: chlorophyllase-1-like [Jatropha curcas]
5 Hb_000622_170 0.1445634733 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF6 [Jatropha curcas]
6 Hb_004117_090 0.1452605901 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 70 [Jatropha curcas]
7 Hb_000331_170 0.1458431375 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
8 Hb_000028_080 0.1466375144 - - PREDICTED: uncharacterized protein At3g17950 [Jatropha curcas]
9 Hb_000363_390 0.1484626678 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
10 Hb_003583_010 0.1490256956 - - PREDICTED: patatin-like protein 6 [Jatropha curcas]
11 Hb_001105_120 0.1497171234 - - glucose-1-phosphate adenylyltransferase, putative [Ricinus communis]
12 Hb_010889_010 0.1502239843 - - PREDICTED: myosin-12 [Jatropha curcas]
13 Hb_000964_050 0.1504029123 - - PREDICTED: uncharacterized protein LOC105628694 [Jatropha curcas]
14 Hb_000071_060 0.151138714 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002411_090 0.1518628091 - - PREDICTED: putative RING-H2 finger protein ATL69 [Jatropha curcas]
16 Hb_000342_040 0.1519711701 - - pollen specific protein sf21, putative [Ricinus communis]
17 Hb_000130_460 0.1523309593 - - hypothetical protein JCGZ_15296 [Jatropha curcas]
18 Hb_000005_240 0.1582789745 - - Shugoshin-1, putative [Ricinus communis]
19 Hb_006198_100 0.1599168676 - - PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
20 Hb_005496_040 0.1599626452 - - PREDICTED: uncharacterized protein LOC105630864 [Jatropha curcas]

Gene co-expression network

sample Hb_000417_090 Hb_000417_090 Hb_000072_230 Hb_000072_230 Hb_000417_090--Hb_000072_230 Hb_000107_360 Hb_000107_360 Hb_000417_090--Hb_000107_360 Hb_000190_170 Hb_000190_170 Hb_000417_090--Hb_000190_170 Hb_000622_170 Hb_000622_170 Hb_000417_090--Hb_000622_170 Hb_004117_090 Hb_004117_090 Hb_000417_090--Hb_004117_090 Hb_000331_170 Hb_000331_170 Hb_000417_090--Hb_000331_170 Hb_000072_230--Hb_000107_360 Hb_000072_230--Hb_000331_170 Hb_000031_240 Hb_000031_240 Hb_000072_230--Hb_000031_240 Hb_011310_170 Hb_011310_170 Hb_000072_230--Hb_011310_170 Hb_000964_050 Hb_000964_050 Hb_000072_230--Hb_000964_050 Hb_000107_360--Hb_000964_050 Hb_006198_100 Hb_006198_100 Hb_000107_360--Hb_006198_100 Hb_002818_060 Hb_002818_060 Hb_000107_360--Hb_002818_060 Hb_005496_040 Hb_005496_040 Hb_000107_360--Hb_005496_040 Hb_002411_090 Hb_002411_090 Hb_000190_170--Hb_002411_090 Hb_039222_010 Hb_039222_010 Hb_000190_170--Hb_039222_010 Hb_001544_090 Hb_001544_090 Hb_000190_170--Hb_001544_090 Hb_007811_020 Hb_007811_020 Hb_000190_170--Hb_007811_020 Hb_000190_170--Hb_004117_090 Hb_001095_020 Hb_001095_020 Hb_000190_170--Hb_001095_020 Hb_047659_010 Hb_047659_010 Hb_000622_170--Hb_047659_010 Hb_000991_030 Hb_000991_030 Hb_000622_170--Hb_000991_030 Hb_008053_030 Hb_008053_030 Hb_000622_170--Hb_008053_030 Hb_000622_170--Hb_004117_090 Hb_071674_010 Hb_071674_010 Hb_000622_170--Hb_071674_010 Hb_004117_090--Hb_005496_040 Hb_000342_040 Hb_000342_040 Hb_004117_090--Hb_000342_040 Hb_004117_090--Hb_001544_090 Hb_005976_110 Hb_005976_110 Hb_004117_090--Hb_005976_110 Hb_000032_420 Hb_000032_420 Hb_004117_090--Hb_000032_420 Hb_000331_170--Hb_000031_240 Hb_031321_020 Hb_031321_020 Hb_000331_170--Hb_031321_020 Hb_007221_020 Hb_007221_020 Hb_000331_170--Hb_007221_020 Hb_005276_140 Hb_005276_140 Hb_000331_170--Hb_005276_140 Hb_019516_010 Hb_019516_010 Hb_000331_170--Hb_019516_010 Hb_004453_160 Hb_004453_160 Hb_000331_170--Hb_004453_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.14943 3.36527 3.35321 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.10267 0.188463 0.151267 0.075313 1.23484

CAGE analysis