Hb_000422_140

Information

Type -
Description -
Location Contig422: 211016-214592
Sequence    

Annotation

kegg
ID rcu:RCOM_1282940
description apoptosis-inducing factor, putative
nr
ID XP_012086316.1
description PREDICTED: apoptosis-inducing factor 2-like isoform X1 [Jatropha curcas]
swissprot
ID Q54NS8
description Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum GN=aifB PE=3 SV=1
trembl
ID A0A067JSW9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22979 PE=4 SV=1
Gene Ontology
ID GO:0005794
description pyridine nucleotide-disulfide oxidoreductase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41733: 211080-214536
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000422_140 0.0 - - PREDICTED: apoptosis-inducing factor 2-like isoform X1 [Jatropha curcas]
2 Hb_005895_040 0.0629782851 - - PREDICTED: tRNA threonylcarbamoyladenosine dehydratase [Jatropha curcas]
3 Hb_144787_030 0.0691365097 - - PREDICTED: protein SLOW GREEN 1, chloroplastic [Jatropha curcas]
4 Hb_004656_060 0.0694269789 - - PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]
5 Hb_000946_120 0.0726854318 - - DNA binding protein, putative [Ricinus communis]
6 Hb_000365_140 0.0760218504 - - PREDICTED: ethanolamine-phosphate cytidylyltransferase [Jatropha curcas]
7 Hb_002477_130 0.0838042743 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002499_070 0.0849243101 - - PREDICTED: uncharacterized protein LOC105628378 isoform X2 [Jatropha curcas]
9 Hb_002942_220 0.0868852587 - - PREDICTED: uncharacterized protein LOC105648740 [Jatropha curcas]
10 Hb_010222_080 0.0870833056 - - PREDICTED: pentatricopeptide repeat-containing protein At2g06000 [Jatropha curcas]
11 Hb_000139_250 0.0874625202 - - PREDICTED: putative methyltransferase C9orf114 [Jatropha curcas]
12 Hb_004701_030 0.0881388772 - - hypothetical protein POPTR_0015s00420g [Populus trichocarpa]
13 Hb_000032_490 0.0911020108 - - PREDICTED: uncharacterized protein At4g10930-like [Jatropha curcas]
14 Hb_001584_290 0.0912610796 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
15 Hb_001541_260 0.0919800914 - - PREDICTED: protein MAK16 homolog [Jatropha curcas]
16 Hb_000116_180 0.0930716899 - - PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform X1 [Jatropha curcas]
17 Hb_000358_250 0.0942517837 - - PREDICTED: cell division cycle protein 27 homolog B [Jatropha curcas]
18 Hb_004162_280 0.0944659781 - - PREDICTED: uncharacterized protein LOC105628004 isoform X1 [Jatropha curcas]
19 Hb_028707_090 0.0946417306 - - PREDICTED: signal peptide peptidase-like 2 [Jatropha curcas]
20 Hb_020665_030 0.0950603821 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000422_140 Hb_000422_140 Hb_005895_040 Hb_005895_040 Hb_000422_140--Hb_005895_040 Hb_144787_030 Hb_144787_030 Hb_000422_140--Hb_144787_030 Hb_004656_060 Hb_004656_060 Hb_000422_140--Hb_004656_060 Hb_000946_120 Hb_000946_120 Hb_000422_140--Hb_000946_120 Hb_000365_140 Hb_000365_140 Hb_000422_140--Hb_000365_140 Hb_002477_130 Hb_002477_130 Hb_000422_140--Hb_002477_130 Hb_009151_020 Hb_009151_020 Hb_005895_040--Hb_009151_020 Hb_005895_040--Hb_002477_130 Hb_005895_040--Hb_004656_060 Hb_004701_030 Hb_004701_030 Hb_005895_040--Hb_004701_030 Hb_002499_070 Hb_002499_070 Hb_005895_040--Hb_002499_070 Hb_004162_280 Hb_004162_280 Hb_144787_030--Hb_004162_280 Hb_001541_260 Hb_001541_260 Hb_144787_030--Hb_001541_260 Hb_000139_250 Hb_000139_250 Hb_144787_030--Hb_000139_250 Hb_144787_030--Hb_000946_120 Hb_000236_100 Hb_000236_100 Hb_144787_030--Hb_000236_100 Hb_004656_060--Hb_004701_030 Hb_023001_020 Hb_023001_020 Hb_004656_060--Hb_023001_020 Hb_000640_220 Hb_000640_220 Hb_004656_060--Hb_000640_220 Hb_002587_020 Hb_002587_020 Hb_004656_060--Hb_002587_020 Hb_012132_030 Hb_012132_030 Hb_000946_120--Hb_012132_030 Hb_000032_490 Hb_000032_490 Hb_000946_120--Hb_000032_490 Hb_000946_120--Hb_000365_140 Hb_000946_120--Hb_001541_260 Hb_000365_140--Hb_002477_130 Hb_000365_140--Hb_000032_490 Hb_000365_140--Hb_000640_220 Hb_000365_140--Hb_005895_040 Hb_000424_010 Hb_000424_010 Hb_002477_130--Hb_000424_010 Hb_002477_130--Hb_000640_220 Hb_000358_250 Hb_000358_250 Hb_002477_130--Hb_000358_250 Hb_001771_120 Hb_001771_120 Hb_002477_130--Hb_001771_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.7227 9.31985 5.54686 4.34781 26.3227 17.1598
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.91662 8.52015 6.69013 4.21703 6.25107

CAGE analysis