Hb_000431_170

Information

Type transcription factor
Description TF Family: C2H2
Location Contig431: 180872-183705
Sequence    

Annotation

kegg
ID rcu:RCOM_1676930
description zinc finger protein, putative
nr
ID XP_012070284.1
description PREDICTED: zinc finger protein 511 [Jatropha curcas]
swissprot
ID Q7ZZ00
description Zinc finger protein 511 OS=Danio rerio GN=znf511 PE=2 SV=1
trembl
ID A0A067LCT1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10111 PE=4 SV=1
Gene Ontology
ID GO:0046872
description zinc finger protein 511

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42232: 180879-183640
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000431_170 0.0 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 511 [Jatropha curcas]
2 Hb_000948_160 0.0528422017 - - PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Jatropha curcas]
3 Hb_006693_020 0.0619087549 - - PREDICTED: frataxin, mitochondrial [Gossypium raimondii]
4 Hb_000081_160 0.0627252869 - - PREDICTED: uncharacterized protein At4g17910 [Jatropha curcas]
5 Hb_000460_030 0.0631772011 - - 4-hydroxybenzoate octaprenyltransferase, putative [Ricinus communis]
6 Hb_000390_300 0.0665955978 transcription factor TF Family: GNAT PREDICTED: histone acetyltransferase MCC1 [Jatropha curcas]
7 Hb_010098_050 0.0675462861 - - PREDICTED: putative deoxyribonuclease tatdn3-A [Jatropha curcas]
8 Hb_002197_050 0.0681426632 - - hypothetical protein CICLE_v10002157mg [Citrus clementina]
9 Hb_006615_240 0.0682860791 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
10 Hb_001318_280 0.0689148386 - - Protein FAM18B, putative [Ricinus communis]
11 Hb_006573_190 0.0698355694 - - PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Jatropha curcas]
12 Hb_031862_100 0.0707407507 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
13 Hb_001341_150 0.0712069763 - - PREDICTED: proteasome subunit beta type-4-like [Jatropha curcas]
14 Hb_000312_080 0.0716483691 - - PREDICTED: transmembrane protein 97-like [Jatropha curcas]
15 Hb_006570_080 0.0722168156 - - PREDICTED: BRCA1-A complex subunit BRE isoform X1 [Jatropha curcas]
16 Hb_000465_390 0.0722751654 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3 [Jatropha curcas]
17 Hb_007928_030 0.0726275331 - - PREDICTED: dual specificity phosphatase Cdc25 [Jatropha curcas]
18 Hb_007676_080 0.0729159825 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 14-like [Jatropha curcas]
19 Hb_003582_060 0.0735582985 transcription factor TF Family: BBR-BPC PREDICTED: protein BASIC PENTACYSTEINE2-like isoform X1 [Jatropha curcas]
20 Hb_001386_040 0.0739648064 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 511 [Jatropha curcas]

Gene co-expression network

sample Hb_000431_170 Hb_000431_170 Hb_000948_160 Hb_000948_160 Hb_000431_170--Hb_000948_160 Hb_006693_020 Hb_006693_020 Hb_000431_170--Hb_006693_020 Hb_000081_160 Hb_000081_160 Hb_000431_170--Hb_000081_160 Hb_000460_030 Hb_000460_030 Hb_000431_170--Hb_000460_030 Hb_000390_300 Hb_000390_300 Hb_000431_170--Hb_000390_300 Hb_010098_050 Hb_010098_050 Hb_000431_170--Hb_010098_050 Hb_001386_040 Hb_001386_040 Hb_000948_160--Hb_001386_040 Hb_189216_020 Hb_189216_020 Hb_000948_160--Hb_189216_020 Hb_001599_040 Hb_001599_040 Hb_000948_160--Hb_001599_040 Hb_002994_030 Hb_002994_030 Hb_000948_160--Hb_002994_030 Hb_000078_120 Hb_000078_120 Hb_000948_160--Hb_000078_120 Hb_006693_020--Hb_000390_300 Hb_000331_200 Hb_000331_200 Hb_006693_020--Hb_000331_200 Hb_004108_070 Hb_004108_070 Hb_006693_020--Hb_004108_070 Hb_000465_390 Hb_000465_390 Hb_006693_020--Hb_000465_390 Hb_000317_390 Hb_000317_390 Hb_006693_020--Hb_000317_390 Hb_001252_130 Hb_001252_130 Hb_000081_160--Hb_001252_130 Hb_000215_110 Hb_000215_110 Hb_000081_160--Hb_000215_110 Hb_002641_060 Hb_002641_060 Hb_000081_160--Hb_002641_060 Hb_001318_280 Hb_001318_280 Hb_000081_160--Hb_001318_280 Hb_000081_160--Hb_001599_040 Hb_006570_080 Hb_006570_080 Hb_000460_030--Hb_006570_080 Hb_003582_060 Hb_003582_060 Hb_000460_030--Hb_003582_060 Hb_000483_260 Hb_000483_260 Hb_000460_030--Hb_000483_260 Hb_005588_060 Hb_005588_060 Hb_000460_030--Hb_005588_060 Hb_008725_230 Hb_008725_230 Hb_000460_030--Hb_008725_230 Hb_008494_100 Hb_008494_100 Hb_000390_300--Hb_008494_100 Hb_024439_010 Hb_024439_010 Hb_000390_300--Hb_024439_010 Hb_006615_240 Hb_006615_240 Hb_000390_300--Hb_006615_240 Hb_007676_080 Hb_007676_080 Hb_000390_300--Hb_007676_080 Hb_006573_190 Hb_006573_190 Hb_000390_300--Hb_006573_190 Hb_010098_050--Hb_006615_240 Hb_001341_150 Hb_001341_150 Hb_010098_050--Hb_001341_150 Hb_000205_090 Hb_000205_090 Hb_010098_050--Hb_000205_090 Hb_019280_050 Hb_019280_050 Hb_010098_050--Hb_019280_050 Hb_008013_050 Hb_008013_050 Hb_010098_050--Hb_008013_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.06682 7.0949 10.1233 11.8248 9.82507 9.0995
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.5889 18.9962 10.5456 13.0467 7.94635

CAGE analysis