Hb_000438_120

Information

Type -
Description -
Location Contig438: 109554-110918
Sequence    

Annotation

kegg
ID rcu:RCOM_0689430
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_002520844.1
description CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
swissprot
ID Q7X996
description CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1
trembl
ID B9S4C5
description Non-specific serine/threonine protein kinase OS=Ricinus communis GN=RCOM_0689430 PE=4 SV=1
Gene Ontology
ID GO:0004674
description cbl-interacting protein kinase 18-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42564: 109417-109748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000438_120 0.0 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
2 Hb_000107_350 0.1446379015 - - PREDICTED: uncharacterized protein LOC105635576 [Jatropha curcas]
3 Hb_000649_040 0.1495658346 - - PREDICTED: dynamin-related protein 1C [Jatropha curcas]
4 Hb_002759_070 0.1526572094 - - PREDICTED: nucleobase-ascorbate transporter 7 [Jatropha curcas]
5 Hb_000808_150 0.1558966674 - - PREDICTED: uncharacterized protein LOC105647444 [Jatropha curcas]
6 Hb_005976_010 0.1560723944 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Jatropha curcas]
7 Hb_161396_010 0.1584329816 - - hypothetical protein F383_26394 [Gossypium arboreum]
8 Hb_000077_310 0.1591544053 - - PREDICTED: clathrin light chain 1 [Jatropha curcas]
9 Hb_000120_940 0.1629047839 - - PREDICTED: phosphoserine aminotransferase 1, chloroplastic-like [Jatropha curcas]
10 Hb_002759_220 0.1653795741 - - altered response to gravity (arg1), plant, putative [Ricinus communis]
11 Hb_001621_100 0.1706390539 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4 [Jatropha curcas]
12 Hb_000264_040 0.1728964328 - - sugar transporter, putative [Ricinus communis]
13 Hb_000445_120 0.1740524369 - - ATP binding protein, putative [Ricinus communis]
14 Hb_001369_010 0.1740754401 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
15 Hb_004957_050 0.1754374614 - - hypothetical protein POPTR_0010s12360g [Populus trichocarpa]
16 Hb_003226_250 0.1800323651 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
17 Hb_000005_140 0.1812209122 transcription factor TF Family: C2H2 unknown [Populus trichocarpa]
18 Hb_000820_110 0.1828790898 - - UDP-XYL synthase 6 isoform 1 [Theobroma cacao]
19 Hb_006569_080 0.18361341 desease resistance Gene Name: NB-ARC hypothetical protein VITISV_024559 [Vitis vinifera]
20 Hb_000115_250 0.1870538261 - - PREDICTED: endonuclease 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000438_120 Hb_000438_120 Hb_000107_350 Hb_000107_350 Hb_000438_120--Hb_000107_350 Hb_000649_040 Hb_000649_040 Hb_000438_120--Hb_000649_040 Hb_002759_070 Hb_002759_070 Hb_000438_120--Hb_002759_070 Hb_000808_150 Hb_000808_150 Hb_000438_120--Hb_000808_150 Hb_005976_010 Hb_005976_010 Hb_000438_120--Hb_005976_010 Hb_161396_010 Hb_161396_010 Hb_000438_120--Hb_161396_010 Hb_000107_350--Hb_000649_040 Hb_000077_310 Hb_000077_310 Hb_000107_350--Hb_000077_310 Hb_011310_040 Hb_011310_040 Hb_000107_350--Hb_011310_040 Hb_000107_350--Hb_000808_150 Hb_003226_250 Hb_003226_250 Hb_000107_350--Hb_003226_250 Hb_004055_020 Hb_004055_020 Hb_000107_350--Hb_004055_020 Hb_003935_070 Hb_003935_070 Hb_000649_040--Hb_003935_070 Hb_000649_040--Hb_000808_150 Hb_000649_040--Hb_000077_310 Hb_000749_020 Hb_000749_020 Hb_000649_040--Hb_000749_020 Hb_000805_010 Hb_000805_010 Hb_000649_040--Hb_000805_010 Hb_002486_020 Hb_002486_020 Hb_002759_070--Hb_002486_020 Hb_000120_940 Hb_000120_940 Hb_002759_070--Hb_000120_940 Hb_000920_160 Hb_000920_160 Hb_002759_070--Hb_000920_160 Hb_002759_070--Hb_161396_010 Hb_001621_100 Hb_001621_100 Hb_002759_070--Hb_001621_100 Hb_000808_150--Hb_000077_310 Hb_000139_300 Hb_000139_300 Hb_000808_150--Hb_000139_300 Hb_000808_150--Hb_000749_020 Hb_001369_010 Hb_001369_010 Hb_000808_150--Hb_001369_010 Hb_000327_360 Hb_000327_360 Hb_000808_150--Hb_000327_360 Hb_000808_150--Hb_161396_010 Hb_000115_250 Hb_000115_250 Hb_005976_010--Hb_000115_250 Hb_000580_110 Hb_000580_110 Hb_005976_010--Hb_000580_110 Hb_000236_180 Hb_000236_180 Hb_005976_010--Hb_000236_180 Hb_029223_040 Hb_029223_040 Hb_005976_010--Hb_029223_040 Hb_012707_010 Hb_012707_010 Hb_005976_010--Hb_012707_010 Hb_000076_030 Hb_000076_030 Hb_161396_010--Hb_000076_030 Hb_007101_260 Hb_007101_260 Hb_161396_010--Hb_007101_260 Hb_000193_340 Hb_000193_340 Hb_161396_010--Hb_000193_340 Hb_048476_140 Hb_048476_140 Hb_161396_010--Hb_048476_140 Hb_002759_220 Hb_002759_220 Hb_161396_010--Hb_002759_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.140905 0.547751 3.32672 9.82786 0.02862 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.905808 1.75406 0.666835 1.32555 7.82232

CAGE analysis