Hb_000445_300

Information

Type -
Description -
Location Contig445: 330725-337208
Sequence    

Annotation

kegg
ID egr:104452342
description wall-associated receptor kinase 5-like
nr
ID XP_010065119.1
description PREDICTED: wall-associated receptor kinase 5-like [Eucalyptus grandis]
swissprot
ID Q9Z1Z1
description Eukaryotic translation initiation factor 2-alpha kinase 3 OS=Rattus norvegicus GN=Eif2ak3 PE=1 SV=1
trembl
ID A0A0D3DQR9
description Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1
Gene Ontology
ID GO:0016021
description atp binding

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000445_300 0.0 - - PREDICTED: wall-associated receptor kinase 5-like [Eucalyptus grandis]
2 Hb_039894_010 0.1606210141 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_176368_010 0.1709385052 - - hypothetical protein POPTR_0019s00300g [Populus trichocarpa]
4 Hb_001529_060 0.1801366427 - - PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Jatropha curcas]
5 Hb_000504_090 0.1886549717 - - PREDICTED: titin isoform X10 [Jatropha curcas]
6 Hb_001009_290 0.1906788016 - - PREDICTED: elongator complex protein 3-like [Populus euphratica]
7 Hb_001522_010 0.1938076057 - - PREDICTED: nucleolar protein 14 isoform X1 [Jatropha curcas]
8 Hb_015763_020 0.1939320368 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
9 Hb_004136_040 0.1963103014 - - putative protein kinase [Arabidopsis thaliana]
10 Hb_000032_310 0.2038926597 - - ring finger protein, putative [Ricinus communis]
11 Hb_057451_010 0.2048246369 - - PREDICTED: uncharacterized protein LOC105635588 [Jatropha curcas]
12 Hb_001504_190 0.2055927157 - - double-stranded RNA binding protein, putative [Ricinus communis]
13 Hb_000264_100 0.2056620491 - - conserved hypothetical protein [Ricinus communis]
14 Hb_009028_030 0.2058259348 desease resistance Gene Name: NB-ARC NBS type disease resistance protein, putative [Theobroma cacao]
15 Hb_002188_090 0.2063496035 - - PREDICTED: pre-mRNA-processing protein 40A isoform X1 [Jatropha curcas]
16 Hb_001989_020 0.2131137962 - - hypothetical protein JCGZ_15521 [Jatropha curcas]
17 Hb_000521_170 0.2131358362 - - PREDICTED: callose synthase 1 [Jatropha curcas]
18 Hb_144824_010 0.2154900356 - - hypothetical protein POPTR_0019s02110g [Populus trichocarpa]
19 Hb_000317_150 0.2160188776 - - PREDICTED: uncharacterized protein LOC104901272 [Beta vulgaris subsp. vulgaris]
20 Hb_000023_060 0.2162671729 - - PREDICTED: uncharacterized protein LOC105633775 [Jatropha curcas]

Gene co-expression network

sample Hb_000445_300 Hb_000445_300 Hb_039894_010 Hb_039894_010 Hb_000445_300--Hb_039894_010 Hb_176368_010 Hb_176368_010 Hb_000445_300--Hb_176368_010 Hb_001529_060 Hb_001529_060 Hb_000445_300--Hb_001529_060 Hb_000504_090 Hb_000504_090 Hb_000445_300--Hb_000504_090 Hb_001009_290 Hb_001009_290 Hb_000445_300--Hb_001009_290 Hb_001522_010 Hb_001522_010 Hb_000445_300--Hb_001522_010 Hb_000115_310 Hb_000115_310 Hb_039894_010--Hb_000115_310 Hb_015763_020 Hb_015763_020 Hb_039894_010--Hb_015763_020 Hb_039894_010--Hb_001009_290 Hb_004136_040 Hb_004136_040 Hb_039894_010--Hb_004136_040 Hb_004920_130 Hb_004920_130 Hb_039894_010--Hb_004920_130 Hb_000859_050 Hb_000859_050 Hb_176368_010--Hb_000859_050 Hb_008103_080 Hb_008103_080 Hb_176368_010--Hb_008103_080 Hb_000327_080 Hb_000327_080 Hb_176368_010--Hb_000327_080 Hb_003739_030 Hb_003739_030 Hb_176368_010--Hb_003739_030 Hb_000922_140 Hb_000922_140 Hb_176368_010--Hb_000922_140 Hb_009178_020 Hb_009178_020 Hb_001529_060--Hb_009178_020 Hb_001529_060--Hb_001009_290 Hb_000685_080 Hb_000685_080 Hb_001529_060--Hb_000685_080 Hb_002849_080 Hb_002849_080 Hb_001529_060--Hb_002849_080 Hb_148209_020 Hb_148209_020 Hb_001529_060--Hb_148209_020 Hb_000317_150 Hb_000317_150 Hb_001529_060--Hb_000317_150 Hb_002217_150 Hb_002217_150 Hb_000504_090--Hb_002217_150 Hb_003236_010 Hb_003236_010 Hb_000504_090--Hb_003236_010 Hb_005843_040 Hb_005843_040 Hb_000504_090--Hb_005843_040 Hb_007101_180 Hb_007101_180 Hb_000504_090--Hb_007101_180 Hb_006816_120 Hb_006816_120 Hb_000504_090--Hb_006816_120 Hb_001433_190 Hb_001433_190 Hb_000504_090--Hb_001433_190 Hb_001009_290--Hb_001522_010 Hb_009558_040 Hb_009558_040 Hb_001009_290--Hb_009558_040 Hb_007885_070 Hb_007885_070 Hb_001009_290--Hb_007885_070 Hb_001009_290--Hb_009178_020 Hb_006829_090 Hb_006829_090 Hb_001009_290--Hb_006829_090 Hb_002188_090 Hb_002188_090 Hb_001522_010--Hb_002188_090 Hb_001522_010--Hb_006829_090 Hb_078477_040 Hb_078477_040 Hb_001522_010--Hb_078477_040 Hb_005462_020 Hb_005462_020 Hb_001522_010--Hb_005462_020 Hb_000313_340 Hb_000313_340 Hb_001522_010--Hb_000313_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.6094 1.28038 0.174221 0.0344691 1.61155 0.854784
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.143276 0.295947 0.107436 1.27047 0.449207

CAGE analysis