Hb_000450_160

Information

Type -
Description -
Location Contig450: 150249-150443
Sequence    

Annotation

kegg
ID rcu:RCOM_1523340
description hypothetical protein
nr
ID KDP43459.1
description hypothetical protein JCGZ_16746 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LGZ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16746 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43162: 150155-150738
cDNA
(Sanger)
(ID:Location)		 006_I16.ab1: 150155-150627 , 007_J09.ab1: 150155-150627 , 033_E02.ab1: 150155-150627

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000450_160 0.0 - - hypothetical protein JCGZ_16746 [Jatropha curcas]
2 Hb_002998_070 0.2108153859 - - hypothetical protein CARUB_v10019139mg, partial [Capsella rubella]
3 Hb_000926_100 0.213748622 - - hypothetical protein B456_007G076800 [Gossypium raimondii]
4 Hb_006538_190 0.2232514335 - - PREDICTED: homocysteine S-methyltransferase 1 isoform X1 [Jatropha curcas]
5 Hb_004724_450 0.2297803324 - - PREDICTED: uncharacterized protein LOC105647069 isoform X1 [Jatropha curcas]
6 Hb_001675_030 0.2359735539 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000270_740 0.2392963952 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
8 Hb_002035_110 0.2409541866 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
9 Hb_004787_040 0.242421089 - - conserved hypothetical protein [Ricinus communis]
10 Hb_008768_020 0.2434020976 - - PREDICTED: uncharacterized protein LOC105639378 [Jatropha curcas]
11 Hb_002835_340 0.2458358899 - - PREDICTED: peroxisomal primary amine oxidase [Jatropha curcas]
12 Hb_002027_030 0.2460804737 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007153_040 0.2469893073 - - PREDICTED: uncharacterized protein LOC105633515 isoform X1 [Jatropha curcas]
14 Hb_007441_240 0.2512744265 - - ethphon-induced protein [Hevea brasiliensis]
15 Hb_029921_030 0.2525138441 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007849_010 0.2532821581 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Populus euphratica]
17 Hb_001140_360 0.2554943271 - - -
18 Hb_006907_080 0.2562165877 - - PREDICTED: RPM1-interacting protein 4-like [Jatropha curcas]
19 Hb_140049_010 0.2576094147 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
20 Hb_000382_020 0.257990858 - - PREDICTED: uncharacterized protein LOC105633610 [Jatropha curcas]

Gene co-expression network

sample Hb_000450_160 Hb_000450_160 Hb_002998_070 Hb_002998_070 Hb_000450_160--Hb_002998_070 Hb_000926_100 Hb_000926_100 Hb_000450_160--Hb_000926_100 Hb_006538_190 Hb_006538_190 Hb_000450_160--Hb_006538_190 Hb_004724_450 Hb_004724_450 Hb_000450_160--Hb_004724_450 Hb_001675_030 Hb_001675_030 Hb_000450_160--Hb_001675_030 Hb_000270_740 Hb_000270_740 Hb_000450_160--Hb_000270_740 Hb_002249_070 Hb_002249_070 Hb_002998_070--Hb_002249_070 Hb_003464_070 Hb_003464_070 Hb_002998_070--Hb_003464_070 Hb_005181_160 Hb_005181_160 Hb_002998_070--Hb_005181_160 Hb_075247_010 Hb_075247_010 Hb_002998_070--Hb_075247_010 Hb_001221_330 Hb_001221_330 Hb_002998_070--Hb_001221_330 Hb_001623_090 Hb_001623_090 Hb_000926_100--Hb_001623_090 Hb_003972_060 Hb_003972_060 Hb_000926_100--Hb_003972_060 Hb_029921_030 Hb_029921_030 Hb_000926_100--Hb_029921_030 Hb_000926_100--Hb_002998_070 Hb_003680_210 Hb_003680_210 Hb_000926_100--Hb_003680_210 Hb_017170_030 Hb_017170_030 Hb_006538_190--Hb_017170_030 Hb_000614_170 Hb_000614_170 Hb_006538_190--Hb_000614_170 Hb_162275_020 Hb_162275_020 Hb_006538_190--Hb_162275_020 Hb_001699_200 Hb_001699_200 Hb_006538_190--Hb_001699_200 Hb_007153_040 Hb_007153_040 Hb_006538_190--Hb_007153_040 Hb_000317_420 Hb_000317_420 Hb_006538_190--Hb_000317_420 Hb_009736_010 Hb_009736_010 Hb_004724_450--Hb_009736_010 Hb_002835_340 Hb_002835_340 Hb_004724_450--Hb_002835_340 Hb_000110_380 Hb_000110_380 Hb_004724_450--Hb_000110_380 Hb_005408_070 Hb_005408_070 Hb_004724_450--Hb_005408_070 Hb_003592_030 Hb_003592_030 Hb_004724_450--Hb_003592_030 Hb_001170_010 Hb_001170_010 Hb_004724_450--Hb_001170_010 Hb_172632_050 Hb_172632_050 Hb_001675_030--Hb_172632_050 Hb_003687_030 Hb_003687_030 Hb_001675_030--Hb_003687_030 Hb_000529_280 Hb_000529_280 Hb_001675_030--Hb_000529_280 Hb_012807_130 Hb_012807_130 Hb_001675_030--Hb_012807_130 Hb_028707_070 Hb_028707_070 Hb_001675_030--Hb_028707_070 Hb_001728_020 Hb_001728_020 Hb_001675_030--Hb_001728_020 Hb_007441_240 Hb_007441_240 Hb_000270_740--Hb_007441_240 Hb_004787_040 Hb_004787_040 Hb_000270_740--Hb_004787_040 Hb_000739_140 Hb_000739_140 Hb_000270_740--Hb_000739_140 Hb_000768_130 Hb_000768_130 Hb_000270_740--Hb_000768_130 Hb_158104_020 Hb_158104_020 Hb_000270_740--Hb_158104_020 Hb_000382_020 Hb_000382_020 Hb_000270_740--Hb_000382_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.92205 123.871 213.176 290.28 5.02619 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
102.259 278.843 140.204 311.59 1.45448

CAGE analysis