Hb_000453_290

Information

Type -
Description -
Location Contig453: 204894-205097
Sequence    

Annotation

kegg
ID egr:104421439
description dr1-associated corepressor-like
nr
ID XP_012075998.1
description PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KHP6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11093 PE=4 SV=1
Gene Ontology
ID GO:0005634
description dr1-associated corepressor-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 002_L21r.ab1: 202117-208521

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000453_290 0.0 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
2 Hb_002592_070 0.0762763415 - - hypothetical protein VITISV_020993 [Vitis vinifera]
3 Hb_022693_090 0.0846345459 - - glycosyltransferase, putative [Ricinus communis]
4 Hb_000468_050 0.0858717556 - - -
5 Hb_002000_100 0.0914007161 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
6 Hb_027405_010 0.0944846837 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
7 Hb_001360_020 0.09469407 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]
8 Hb_001117_180 0.0969597366 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
9 Hb_009225_070 0.0992868966 - - tonoplast intrinsic protein, putative [Ricinus communis]
10 Hb_142056_010 0.1005539034 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
11 Hb_002370_050 0.1009426349 - - hypothetical protein JCGZ_18849 [Jatropha curcas]
12 Hb_007403_100 0.108818859 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
13 Hb_002007_330 0.1130045603 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
14 Hb_002384_030 0.1135130821 - - conserved hypothetical protein [Ricinus communis]
15 Hb_034688_030 0.1183278689 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
16 Hb_008731_010 0.11893002 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
17 Hb_026144_040 0.1192252695 - - -
18 Hb_000816_150 0.1231115051 - - oligopeptide transporter, putative [Ricinus communis]
19 Hb_012553_030 0.1231906733 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
20 Hb_004785_170 0.1239113504 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]

Gene co-expression network

sample Hb_000453_290 Hb_000453_290 Hb_002592_070 Hb_002592_070 Hb_000453_290--Hb_002592_070 Hb_022693_090 Hb_022693_090 Hb_000453_290--Hb_022693_090 Hb_000468_050 Hb_000468_050 Hb_000453_290--Hb_000468_050 Hb_002000_100 Hb_002000_100 Hb_000453_290--Hb_002000_100 Hb_027405_010 Hb_027405_010 Hb_000453_290--Hb_027405_010 Hb_001360_020 Hb_001360_020 Hb_000453_290--Hb_001360_020 Hb_002592_070--Hb_000468_050 Hb_012553_030 Hb_012553_030 Hb_002592_070--Hb_012553_030 Hb_009225_070 Hb_009225_070 Hb_002592_070--Hb_009225_070 Hb_001117_180 Hb_001117_180 Hb_002592_070--Hb_001117_180 Hb_002592_070--Hb_022693_090 Hb_002384_030 Hb_002384_030 Hb_022693_090--Hb_002384_030 Hb_022693_090--Hb_009225_070 Hb_022693_090--Hb_001360_020 Hb_011314_010 Hb_011314_010 Hb_022693_090--Hb_011314_010 Hb_000468_050--Hb_009225_070 Hb_000468_050--Hb_012553_030 Hb_000816_150 Hb_000816_150 Hb_000468_050--Hb_000816_150 Hb_004785_170 Hb_004785_170 Hb_000468_050--Hb_004785_170 Hb_002007_330 Hb_002007_330 Hb_002000_100--Hb_002007_330 Hb_142056_010 Hb_142056_010 Hb_002000_100--Hb_142056_010 Hb_002000_100--Hb_001360_020 Hb_007403_100 Hb_007403_100 Hb_002000_100--Hb_007403_100 Hb_008731_010 Hb_008731_010 Hb_002000_100--Hb_008731_010 Hb_002000_100--Hb_002384_030 Hb_027405_010--Hb_002384_030 Hb_000076_280 Hb_000076_280 Hb_027405_010--Hb_000076_280 Hb_027405_010--Hb_001117_180 Hb_027400_020 Hb_027400_020 Hb_027405_010--Hb_027400_020 Hb_002370_050 Hb_002370_050 Hb_027405_010--Hb_002370_050 Hb_001360_020--Hb_002384_030 Hb_001360_020--Hb_142056_010 Hb_001360_020--Hb_002007_330 Hb_001360_020--Hb_008731_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.44531 2.34955 20.8675 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.51757 4.89948

CAGE analysis