Hb_000457_060

Information

Type -
Description -
Location Contig457: 103913-113311
Sequence    

Annotation

kegg
ID cit:102608770
description glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like
nr
ID AIE47268.1
description glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
swissprot
ID Q9FJI5
description Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=ACG12 PE=2 SV=1
trembl
ID A0A068LJY6
description Glucose-6-phosphate 1-dehydrogenase OS=Hevea brasiliensis GN=G6PDH-3 PE=2 SV=1
Gene Ontology
ID GO:0005829
description glucose-6-phosphate 1- cytoplasmic isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43454: 103945-113294
cDNA
(Sanger)
(ID:Location)		 010_E01.ab1: 104110-106160 , 016_M10.ab1: 104305-109584 , 048_E19.ab1: 104305-109777

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000457_060 0.0 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
2 Hb_000335_010 0.0642171313 - - WD-repeat protein, putative [Ricinus communis]
3 Hb_004881_050 0.0654447469 - - PREDICTED: obg-like ATPase 1 [Jatropha curcas]
4 Hb_000370_030 0.0690047926 - - PREDICTED: uncharacterized protein LOC105639493 [Jatropha curcas]
5 Hb_004608_020 0.0701854281 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
6 Hb_000789_080 0.0742702688 - - PREDICTED: arginine--tRNA ligase, cytoplasmic-like isoform X1 [Jatropha curcas]
7 Hb_000631_150 0.0759966696 - - PREDICTED: RNA polymerase-associated protein LEO1 [Jatropha curcas]
8 Hb_031754_010 0.0813365387 transcription factor TF Family: LIM zinc ion binding protein, putative [Ricinus communis]
9 Hb_001609_010 0.0832117255 desease resistance Gene Name: NB-ARC PREDICTED: putative inactive disease susceptibility protein LOV1 [Jatropha curcas]
10 Hb_001221_040 0.0836954504 - - PREDICTED: nucleolar protein 56-like [Jatropha curcas]
11 Hb_021409_170 0.0854371829 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
12 Hb_009118_010 0.0876365203 - - methionine aminopeptidase, putative [Ricinus communis]
13 Hb_007407_040 0.0892592473 - - ankyrin repeat-containing protein, putative [Ricinus communis]
14 Hb_010866_040 0.0895557703 - - PREDICTED: metal transporter Nramp2-like [Jatropha curcas]
15 Hb_000316_030 0.0897624954 - - zinc finger protein, putative [Ricinus communis]
16 Hb_000317_440 0.0902712849 - - PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X2 [Jatropha curcas]
17 Hb_003434_060 0.091619042 - - PREDICTED: membrane-bound transcription factor site-2 protease homolog isoform X1 [Jatropha curcas]
18 Hb_006663_100 0.0917444985 - - hypothetical protein JCGZ_06980 [Jatropha curcas]
19 Hb_002893_150 0.0924464493 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2 [Jatropha curcas]
20 Hb_000046_440 0.0927114184 transcription factor TF Family: SNF2 PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000457_060 Hb_000457_060 Hb_000335_010 Hb_000335_010 Hb_000457_060--Hb_000335_010 Hb_004881_050 Hb_004881_050 Hb_000457_060--Hb_004881_050 Hb_000370_030 Hb_000370_030 Hb_000457_060--Hb_000370_030 Hb_004608_020 Hb_004608_020 Hb_000457_060--Hb_004608_020 Hb_000789_080 Hb_000789_080 Hb_000457_060--Hb_000789_080 Hb_000631_150 Hb_000631_150 Hb_000457_060--Hb_000631_150 Hb_031754_010 Hb_031754_010 Hb_000335_010--Hb_031754_010 Hb_000335_010--Hb_000789_080 Hb_001437_100 Hb_001437_100 Hb_000335_010--Hb_001437_100 Hb_002043_170 Hb_002043_170 Hb_000335_010--Hb_002043_170 Hb_002883_010 Hb_002883_010 Hb_000335_010--Hb_002883_010 Hb_079326_010 Hb_079326_010 Hb_004881_050--Hb_079326_010 Hb_000372_040 Hb_000372_040 Hb_004881_050--Hb_000372_040 Hb_003434_060 Hb_003434_060 Hb_004881_050--Hb_003434_060 Hb_002811_120 Hb_002811_120 Hb_004881_050--Hb_002811_120 Hb_063047_010 Hb_063047_010 Hb_004881_050--Hb_063047_010 Hb_000184_130 Hb_000184_130 Hb_000370_030--Hb_000184_130 Hb_000300_280 Hb_000300_280 Hb_000370_030--Hb_000300_280 Hb_004310_060 Hb_004310_060 Hb_000370_030--Hb_004310_060 Hb_000568_040 Hb_000568_040 Hb_000370_030--Hb_000568_040 Hb_000316_030 Hb_000316_030 Hb_000370_030--Hb_000316_030 Hb_009118_010 Hb_009118_010 Hb_004608_020--Hb_009118_010 Hb_004608_020--Hb_000631_150 Hb_000116_170 Hb_000116_170 Hb_004608_020--Hb_000116_170 Hb_000017_340 Hb_000017_340 Hb_004608_020--Hb_000017_340 Hb_000078_100 Hb_000078_100 Hb_004608_020--Hb_000078_100 Hb_000531_090 Hb_000531_090 Hb_000789_080--Hb_000531_090 Hb_002893_150 Hb_002893_150 Hb_000789_080--Hb_002893_150 Hb_026099_010 Hb_026099_010 Hb_000789_080--Hb_026099_010 Hb_002400_180 Hb_002400_180 Hb_000789_080--Hb_002400_180 Hb_002044_060 Hb_002044_060 Hb_000789_080--Hb_002044_060 Hb_000317_440 Hb_000317_440 Hb_000631_150--Hb_000317_440 Hb_000134_360 Hb_000134_360 Hb_000631_150--Hb_000134_360 Hb_000849_100 Hb_000849_100 Hb_000631_150--Hb_000849_100 Hb_000318_140 Hb_000318_140 Hb_000631_150--Hb_000318_140 Hb_000631_150--Hb_031754_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
224.177 59.7571 28.9555 58.2569 175.383 249.472
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
131.991 48.6121 84.647 100.695 46.4028

CAGE analysis