Hb_000462_080

Information

Type -
Description -
Location Contig462: 115073-122106
Sequence    

Annotation

kegg
ID rcu:RCOM_1352220
description o-methyltransferase, putative (EC:2.1.1.68)
nr
ID XP_012082506.1
description PREDICTED: quercetin 3-O-methyltransferase 1 [Jatropha curcas]
swissprot
ID Q6T1F5
description Caffeic acid 3-O-methyltransferase OS=Ammi majus GN=COMT PE=1 SV=1
trembl
ID A0A067JZD6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16601 PE=4 SV=1
Gene Ontology
ID GO:0008171
description caffeic acid 3-o-methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43783: 115076-122105
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000462_080 0.0 - - PREDICTED: quercetin 3-O-methyltransferase 1 [Jatropha curcas]
2 Hb_005375_060 0.1523767621 - - PREDICTED: probably inactive receptor-like protein kinase At2g46850 [Jatropha curcas]
3 Hb_001040_060 0.1695010569 - - PREDICTED: CBS domain-containing protein CBSX5-like [Jatropha curcas]
4 Hb_007545_110 0.1705837069 - - catalytic, putative [Ricinus communis]
5 Hb_000500_370 0.1707174216 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
6 Hb_002095_050 0.1788295423 - - PREDICTED: uncharacterized protein LOC104447479 [Eucalyptus grandis]
7 Hb_008173_060 0.1808641181 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]
8 Hb_007123_080 0.1810556996 - - big map kinase/bmk, putative [Ricinus communis]
9 Hb_002540_070 0.1815117296 - - PREDICTED: protein cornichon homolog 1 [Jatropha curcas]
10 Hb_022092_040 0.1824891561 - - PREDICTED: serine/arginine repetitive matrix protein 1 [Jatropha curcas]
11 Hb_014361_170 0.1892517222 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 37 [Jatropha curcas]
12 Hb_002078_230 0.1909328124 - - PREDICTED: HORMA domain-containing protein 1 [Jatropha curcas]
13 Hb_006120_120 0.1924557595 - - conserved hypothetical protein [Ricinus communis]
14 Hb_008775_030 0.192951919 - - PREDICTED: ferric reduction oxidase 7, chloroplastic-like [Jatropha curcas]
15 Hb_000181_270 0.1945362346 - - ATP binding protein, putative [Ricinus communis]
16 Hb_000308_010 0.1963494354 - - PREDICTED: uncharacterized protein LOC105639684 [Jatropha curcas]
17 Hb_001776_130 0.1988715697 - - metallothionein [Hevea brasiliensis]
18 Hb_001634_030 0.1989356996 - - Receptor like protein 1, putative [Theobroma cacao]
19 Hb_001951_210 0.2013150075 - - conserved hypothetical protein [Ricinus communis]
20 Hb_006262_030 0.202603216 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000462_080 Hb_000462_080 Hb_005375_060 Hb_005375_060 Hb_000462_080--Hb_005375_060 Hb_001040_060 Hb_001040_060 Hb_000462_080--Hb_001040_060 Hb_007545_110 Hb_007545_110 Hb_000462_080--Hb_007545_110 Hb_000500_370 Hb_000500_370 Hb_000462_080--Hb_000500_370 Hb_002095_050 Hb_002095_050 Hb_000462_080--Hb_002095_050 Hb_008173_060 Hb_008173_060 Hb_000462_080--Hb_008173_060 Hb_001581_040 Hb_001581_040 Hb_005375_060--Hb_001581_040 Hb_007163_080 Hb_007163_080 Hb_005375_060--Hb_007163_080 Hb_002045_260 Hb_002045_260 Hb_005375_060--Hb_002045_260 Hb_011622_010 Hb_011622_010 Hb_005375_060--Hb_011622_010 Hb_042098_010 Hb_042098_010 Hb_005375_060--Hb_042098_010 Hb_014361_170 Hb_014361_170 Hb_001040_060--Hb_014361_170 Hb_001627_010 Hb_001627_010 Hb_001040_060--Hb_001627_010 Hb_004970_070 Hb_004970_070 Hb_001040_060--Hb_004970_070 Hb_004679_040 Hb_004679_040 Hb_001040_060--Hb_004679_040 Hb_002217_190 Hb_002217_190 Hb_001040_060--Hb_002217_190 Hb_000567_330 Hb_000567_330 Hb_001040_060--Hb_000567_330 Hb_038044_010 Hb_038044_010 Hb_007545_110--Hb_038044_010 Hb_022092_040 Hb_022092_040 Hb_007545_110--Hb_022092_040 Hb_000260_610 Hb_000260_610 Hb_007545_110--Hb_000260_610 Hb_024973_020 Hb_024973_020 Hb_007545_110--Hb_024973_020 Hb_000032_200 Hb_000032_200 Hb_007545_110--Hb_000032_200 Hb_176472_020 Hb_176472_020 Hb_007545_110--Hb_176472_020 Hb_001102_190 Hb_001102_190 Hb_000500_370--Hb_001102_190 Hb_002794_040 Hb_002794_040 Hb_000500_370--Hb_002794_040 Hb_002540_070 Hb_002540_070 Hb_000500_370--Hb_002540_070 Hb_007123_080 Hb_007123_080 Hb_000500_370--Hb_007123_080 Hb_002400_050 Hb_002400_050 Hb_000500_370--Hb_002400_050 Hb_001776_130 Hb_001776_130 Hb_002095_050--Hb_001776_130 Hb_004306_130 Hb_004306_130 Hb_002095_050--Hb_004306_130 Hb_005993_030 Hb_005993_030 Hb_002095_050--Hb_005993_030 Hb_000416_190 Hb_000416_190 Hb_002095_050--Hb_000416_190 Hb_003687_040 Hb_003687_040 Hb_002095_050--Hb_003687_040 Hb_002095_050--Hb_014361_170 Hb_008173_060--Hb_002217_190 Hb_000134_030 Hb_000134_030 Hb_008173_060--Hb_000134_030 Hb_004452_090 Hb_004452_090 Hb_008173_060--Hb_004452_090 Hb_008173_060--Hb_176472_020 Hb_008173_060--Hb_007545_110 Hb_012545_030 Hb_012545_030 Hb_008173_060--Hb_012545_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.35822 40.8992 152.38 26.8122 3.87077 3.62249
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.39604 10.6697 1.24791 35.4991 11.3708

CAGE analysis