Hb_000463_040

Information

Type -
Description -
Location Contig463: 19669-20827
Sequence    

Annotation

kegg
ID pop:POPTR_0010s07480g
description POPTRDRAFT_229952; hypothetical protein
nr
ID XP_012077634.1
description PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
swissprot
ID Q9T0G7
description Histone-lysine N-methyltransferase family member SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=1 SV=1
trembl
ID A0A067KB37
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12891 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000463_040 0.0 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
2 Hb_002007_270 0.1063982279 - - PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g05340-like [Jatropha curcas]
3 Hb_000977_080 0.1121998023 - - type II inositol 5-phosphatase, putative [Ricinus communis]
4 Hb_000260_050 0.1132858721 - - PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Jatropha curcas]
5 Hb_007747_090 0.1171062289 - - PREDICTED: cold-inducible RNA-binding protein [Jatropha curcas]
6 Hb_000576_030 0.1218041723 - - PREDICTED: pentatricopeptide repeat-containing protein At2g20540 [Jatropha curcas]
7 Hb_005078_040 0.1221284949 desease resistance Gene Name: NB-ARC putative disease resistance gene NBS-LRR family protein [Populus trichocarpa]
8 Hb_052135_030 0.123038273 - - PREDICTED: huntingtin-interacting protein K [Jatropha curcas]
9 Hb_000531_020 0.1260315438 - - PREDICTED: uncharacterized protein At4g28440-like [Populus euphratica]
10 Hb_066807_010 0.1261593658 - - PREDICTED: uncharacterized protein LOC105628412 [Jatropha curcas]
11 Hb_000035_380 0.1265120633 - - -
12 Hb_143813_010 0.1268376152 - - PREDICTED: 60S ribosomal protein L13-1 [Nelumbo nucifera]
13 Hb_000152_430 0.129354468 - - PREDICTED: 40S ribosomal protein S20-1 [Jatropha curcas]
14 Hb_004899_220 0.1299133702 - - PREDICTED: adrenodoxin-like protein 2, mitochondrial [Jatropha curcas]
15 Hb_001235_210 0.1307685656 - - PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial [Jatropha curcas]
16 Hb_000045_130 0.1313131992 - - 60S acidic ribosomal protein P0A [Hevea brasiliensis]
17 Hb_001842_070 0.1314281155 - - PREDICTED: uncharacterized protein LOC105637106 [Jatropha curcas]
18 Hb_000297_050 0.1316152676 - - hypothetical protein JCGZ_08840 [Jatropha curcas]
19 Hb_004586_190 0.1317975184 - - PREDICTED: protein CutA, chloroplastic [Jatropha curcas]
20 Hb_003120_060 0.1326369326 - - PREDICTED: prostaglandin E synthase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000463_040 Hb_000463_040 Hb_002007_270 Hb_002007_270 Hb_000463_040--Hb_002007_270 Hb_000977_080 Hb_000977_080 Hb_000463_040--Hb_000977_080 Hb_000260_050 Hb_000260_050 Hb_000463_040--Hb_000260_050 Hb_007747_090 Hb_007747_090 Hb_000463_040--Hb_007747_090 Hb_000576_030 Hb_000576_030 Hb_000463_040--Hb_000576_030 Hb_005078_040 Hb_005078_040 Hb_000463_040--Hb_005078_040 Hb_004852_030 Hb_004852_030 Hb_002007_270--Hb_004852_030 Hb_001538_010 Hb_001538_010 Hb_002007_270--Hb_001538_010 Hb_026048_100 Hb_026048_100 Hb_002007_270--Hb_026048_100 Hb_000622_310 Hb_000622_310 Hb_002007_270--Hb_000622_310 Hb_003297_030 Hb_003297_030 Hb_002007_270--Hb_003297_030 Hb_000172_400 Hb_000172_400 Hb_002007_270--Hb_000172_400 Hb_000392_270 Hb_000392_270 Hb_000977_080--Hb_000392_270 Hb_003551_020 Hb_003551_020 Hb_000977_080--Hb_003551_020 Hb_000045_130 Hb_000045_130 Hb_000977_080--Hb_000045_130 Hb_004645_050 Hb_004645_050 Hb_000977_080--Hb_004645_050 Hb_001369_650 Hb_001369_650 Hb_000977_080--Hb_001369_650 Hb_000019_230 Hb_000019_230 Hb_000977_080--Hb_000019_230 Hb_000260_050--Hb_007747_090 Hb_000483_160 Hb_000483_160 Hb_000260_050--Hb_000483_160 Hb_004899_220 Hb_004899_220 Hb_000260_050--Hb_004899_220 Hb_002477_240 Hb_002477_240 Hb_000260_050--Hb_002477_240 Hb_000260_050--Hb_000977_080 Hb_001754_150 Hb_001754_150 Hb_000260_050--Hb_001754_150 Hb_143813_010 Hb_143813_010 Hb_007747_090--Hb_143813_010 Hb_000318_380 Hb_000318_380 Hb_007747_090--Hb_000318_380 Hb_007747_090--Hb_000045_130 Hb_007747_090--Hb_001369_650 Hb_007747_090--Hb_000977_080 Hb_185467_020 Hb_185467_020 Hb_000576_030--Hb_185467_020 Hb_008453_150 Hb_008453_150 Hb_000576_030--Hb_008453_150 Hb_000576_030--Hb_003297_030 Hb_000084_310 Hb_000084_310 Hb_000576_030--Hb_000084_310 Hb_004195_160 Hb_004195_160 Hb_000576_030--Hb_004195_160 Hb_002890_340 Hb_002890_340 Hb_000576_030--Hb_002890_340 Hb_002662_100 Hb_002662_100 Hb_005078_040--Hb_002662_100 Hb_004586_190 Hb_004586_190 Hb_005078_040--Hb_004586_190 Hb_003638_030 Hb_003638_030 Hb_005078_040--Hb_003638_030 Hb_005078_040--Hb_002007_270 Hb_005078_040--Hb_026048_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.29276 0.407343 0.170211 0.143573 1.72034 2.0642
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.868925 2.44807 1.33206 0.277054 0.227319

CAGE analysis