Hb_000465_430

Information

Type -
Description -
Location Contig465: 395638-398032
Sequence    

Annotation

kegg
ID cit:102623256
description uncharacterized LOC102623256
nr
ID XP_012070067.1
description PREDICTED: uncharacterized protein LOC105632325 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KY65
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03459 PE=4 SV=1
Gene Ontology
ID GO:0016021
description PREDICTED: uncharacterized protein LOC105632325

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44008: 395798-398028
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000465_430 0.0 - - PREDICTED: uncharacterized protein LOC105632325 [Jatropha curcas]
2 Hb_012092_010 0.0550021416 - - PREDICTED: uncharacterized protein LOC105635929 [Jatropha curcas]
3 Hb_002495_040 0.0557943193 - - PREDICTED: chaperone protein dnaJ 6 isoform X1 [Jatropha curcas]
4 Hb_003502_080 0.0626117376 - - vacuolar protein sorting, putative [Ricinus communis]
5 Hb_033843_010 0.0633017255 - - PREDICTED: cell division control protein 2 homolog A isoform X1 [Jatropha curcas]
6 Hb_005016_170 0.0639993662 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000092_100 0.0674462063 - - PREDICTED: protein EMSY-LIKE 1 [Jatropha curcas]
8 Hb_001936_080 0.0712219679 - - PREDICTED: RNA-binding protein 48-like [Jatropha curcas]
9 Hb_000457_110 0.0717263386 - - Mitochondrial ribosomal protein L37 isoform 1 [Theobroma cacao]
10 Hb_003030_070 0.0720903735 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
11 Hb_000349_060 0.0750385624 - - PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera]
12 Hb_000363_500 0.0759005055 - - PREDICTED: EH domain-containing protein 1 isoform X2 [Jatropha curcas]
13 Hb_000808_040 0.0762410168 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 3 [Jatropha curcas]
14 Hb_004944_010 0.0771262696 - - small nuclear ribonucleoprotein E [Hevea brasiliensis]
15 Hb_007218_080 0.0776530249 - - PREDICTED: uncharacterized protein LOC105631523 [Jatropha curcas]
16 Hb_023001_050 0.0780219288 - - hypothetical protein POPTR_0006s10330g [Populus trichocarpa]
17 Hb_007594_130 0.0783926243 - - PREDICTED: lysophospholipid acyltransferase LPEAT2 isoform X1 [Jatropha curcas]
18 Hb_150360_030 0.0786747203 - - PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like [Jatropha curcas]
19 Hb_003058_130 0.0793720374 - - PREDICTED: protein N-lysine methyltransferase METTL21A isoform X1 [Jatropha curcas]
20 Hb_010691_060 0.0795220777 - - PREDICTED: 40S ribosomal protein S6 [Jatropha curcas]

Gene co-expression network

sample Hb_000465_430 Hb_000465_430 Hb_012092_010 Hb_012092_010 Hb_000465_430--Hb_012092_010 Hb_002495_040 Hb_002495_040 Hb_000465_430--Hb_002495_040 Hb_003502_080 Hb_003502_080 Hb_000465_430--Hb_003502_080 Hb_033843_010 Hb_033843_010 Hb_000465_430--Hb_033843_010 Hb_005016_170 Hb_005016_170 Hb_000465_430--Hb_005016_170 Hb_000092_100 Hb_000092_100 Hb_000465_430--Hb_000092_100 Hb_002391_300 Hb_002391_300 Hb_012092_010--Hb_002391_300 Hb_012092_010--Hb_002495_040 Hb_003030_070 Hb_003030_070 Hb_012092_010--Hb_003030_070 Hb_001936_080 Hb_001936_080 Hb_012092_010--Hb_001936_080 Hb_001195_760 Hb_001195_760 Hb_012092_010--Hb_001195_760 Hb_002495_040--Hb_003030_070 Hb_001369_180 Hb_001369_180 Hb_002495_040--Hb_001369_180 Hb_002495_040--Hb_000092_100 Hb_002495_040--Hb_001936_080 Hb_003502_080--Hb_005016_170 Hb_003502_080--Hb_033843_010 Hb_023001_050 Hb_023001_050 Hb_003502_080--Hb_023001_050 Hb_021409_020 Hb_021409_020 Hb_003502_080--Hb_021409_020 Hb_000204_040 Hb_000204_040 Hb_003502_080--Hb_000204_040 Hb_003058_130 Hb_003058_130 Hb_033843_010--Hb_003058_130 Hb_001006_170 Hb_001006_170 Hb_033843_010--Hb_001006_170 Hb_033153_050 Hb_033153_050 Hb_033843_010--Hb_033153_050 Hb_003392_040 Hb_003392_040 Hb_033843_010--Hb_003392_040 Hb_001158_220 Hb_001158_220 Hb_005016_170--Hb_001158_220 Hb_002671_100 Hb_002671_100 Hb_005016_170--Hb_002671_100 Hb_000956_030 Hb_000956_030 Hb_005016_170--Hb_000956_030 Hb_010691_060 Hb_010691_060 Hb_005016_170--Hb_010691_060 Hb_001635_170 Hb_001635_170 Hb_000092_100--Hb_001635_170 Hb_000092_100--Hb_001936_080 Hb_096563_010 Hb_096563_010 Hb_000092_100--Hb_096563_010 Hb_000092_100--Hb_003030_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.6831 5.60948 6.93751 9.30218 14.3398 18.7559
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.9504 13.2381 8.31997 5.23968 3.60666

CAGE analysis