Hb_000466_060

Information

Type -
Description -
Location Contig466: 150018-152372
Sequence    

Annotation

kegg
ID rcu:RCOM_0880730
description phosphofructokinase, putative (EC:2.7.1.11)
nr
ID AIE47271.1
description phosphofructokinase [Hevea brasiliensis]
swissprot
ID Q9FIK0
description ATP-dependent 6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1
trembl
ID A0A068LLN6
description ATP-dependent 6-phosphofructokinase OS=Hevea brasiliensis GN=PFK2 PE=2 SV=1
Gene Ontology
ID GO:0003872
description atp-dependent 6-phosphofructokinase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44085: 150128-152322
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000466_060 0.0 - - phosphofructokinase [Hevea brasiliensis]
2 Hb_001523_010 0.0618070411 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_25496 [Jatropha curcas]
3 Hb_000172_530 0.0842408651 - - PREDICTED: UBP1-associated protein 2B-like isoform X1 [Jatropha curcas]
4 Hb_113216_010 0.0901046601 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]
5 Hb_000213_060 0.1007423577 - - PREDICTED: RRP12-like protein isoform X1 [Jatropha curcas]
6 Hb_002837_070 0.1078303079 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 8-like isoform X1 [Jatropha curcas]
7 Hb_000016_180 0.1119599133 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]
8 Hb_001846_080 0.1132130088 - - PREDICTED: poly(rC)-binding protein 3-like [Nicotiana sylvestris]
9 Hb_006901_040 0.1151587655 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000565_020 0.1187820612 - - PREDICTED: alpha-galactosidase 3 [Jatropha curcas]
11 Hb_000320_440 0.1209666682 - - PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4 isoform X1 [Jatropha curcas]
12 Hb_001252_170 0.1221521139 desease resistance Gene Name: Exostosin hypothetical protein PRUPE_ppa001357mg [Prunus persica]
13 Hb_000856_100 0.1227506361 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]
14 Hb_006478_070 0.124959023 - - PREDICTED: uncharacterized protein LOC105649957 [Jatropha curcas]
15 Hb_000185_090 0.1251302181 desease resistance Gene Name: CDC48_N PREDICTED: cell division cycle protein 48 homolog [Jatropha curcas]
16 Hb_005028_010 0.1260174049 - - interferon-induced guanylate-binding protein, putative [Ricinus communis]
17 Hb_000212_280 0.1275229434 - - PREDICTED: putative RNA-binding protein Luc7-like 2 [Gossypium raimondii]
18 Hb_174865_050 0.1283293599 - - PREDICTED: neuroguidin [Jatropha curcas]
19 Hb_025048_040 0.130799209 - - PREDICTED: NAP1-related protein 2 [Jatropha curcas]
20 Hb_001140_080 0.1316245352 - - PREDICTED: membrane steroid-binding protein 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_000466_060 Hb_000466_060 Hb_001523_010 Hb_001523_010 Hb_000466_060--Hb_001523_010 Hb_000172_530 Hb_000172_530 Hb_000466_060--Hb_000172_530 Hb_113216_010 Hb_113216_010 Hb_000466_060--Hb_113216_010 Hb_000213_060 Hb_000213_060 Hb_000466_060--Hb_000213_060 Hb_002837_070 Hb_002837_070 Hb_000466_060--Hb_002837_070 Hb_000016_180 Hb_000016_180 Hb_000466_060--Hb_000016_180 Hb_001523_010--Hb_000172_530 Hb_001523_010--Hb_113216_010 Hb_005016_030 Hb_005016_030 Hb_001523_010--Hb_005016_030 Hb_000270_450 Hb_000270_450 Hb_001523_010--Hb_000270_450 Hb_001825_010 Hb_001825_010 Hb_001523_010--Hb_001825_010 Hb_000320_440 Hb_000320_440 Hb_000172_530--Hb_000320_440 Hb_001846_080 Hb_001846_080 Hb_000172_530--Hb_001846_080 Hb_006478_070 Hb_006478_070 Hb_000172_530--Hb_006478_070 Hb_000172_530--Hb_005016_030 Hb_000212_280 Hb_000212_280 Hb_113216_010--Hb_000212_280 Hb_113216_010--Hb_000016_180 Hb_113216_010--Hb_002837_070 Hb_000185_090 Hb_000185_090 Hb_113216_010--Hb_000185_090 Hb_025048_040 Hb_025048_040 Hb_113216_010--Hb_025048_040 Hb_174865_050 Hb_174865_050 Hb_113216_010--Hb_174865_050 Hb_010189_010 Hb_010189_010 Hb_000213_060--Hb_010189_010 Hb_000213_060--Hb_113216_010 Hb_000213_060--Hb_000016_180 Hb_000213_060--Hb_000185_090 Hb_002918_070 Hb_002918_070 Hb_000213_060--Hb_002918_070 Hb_061256_030 Hb_061256_030 Hb_002837_070--Hb_061256_030 Hb_002837_070--Hb_010189_010 Hb_002837_070--Hb_174865_050 Hb_002837_070--Hb_000212_280 Hb_000211_090 Hb_000211_090 Hb_002837_070--Hb_000211_090 Hb_000016_180--Hb_000185_090 Hb_000779_040 Hb_000779_040 Hb_000016_180--Hb_000779_040 Hb_000016_180--Hb_002918_070 Hb_000792_110 Hb_000792_110 Hb_000016_180--Hb_000792_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
552.14 108.683 6.40813 28.0109 436.881 813.981
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
203.654 92.1088 122.12 60.7859 13.5859

CAGE analysis