Hb_000473_010

Information

Type -
Description -
Location Contig473: 11005-12477
Sequence    

Annotation

kegg
ID tcc:TCM_020070
description Alpha/beta-Hydrolases superfamily protein
nr
ID XP_012066389.1
description PREDICTED: galactolipase DONGLE, chloroplastic [Jatropha curcas]
swissprot
ID Q9MA46
description Galactolipase DONGLE, chloroplastic OS=Arabidopsis thaliana GN=DGL PE=1 SV=1
trembl
ID A0A067LED7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23817 PE=4 SV=1
Gene Ontology
ID GO:0016787
description galactolipase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000473_010 0.0 - - PREDICTED: galactolipase DONGLE, chloroplastic [Jatropha curcas]
2 Hb_000699_200 0.031310579 - - hypothetical protein POPTR_0019s02340g [Populus trichocarpa]
3 Hb_003683_090 0.0632811228 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
4 Hb_002193_050 0.0772018288 - - PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
5 Hb_000890_190 0.0878116635 - - glutaredoxin, grx, putative [Ricinus communis]
6 Hb_002290_100 0.1019011253 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
7 Hb_001511_130 0.1095047935 - - PREDICTED: taxadien-5-alpha-ol O-acetyltransferase [Jatropha curcas]
8 Hb_006124_040 0.1298883101 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
9 Hb_000002_130 0.1345627777 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
10 Hb_168039_020 0.1352184925 - - -
11 Hb_000926_170 0.1373964982 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001405_260 0.1378322455 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
13 Hb_005648_030 0.1380079783 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH18-like [Jatropha curcas]
14 Hb_007040_030 0.1389758647 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
15 Hb_000896_140 0.1391377809 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
16 Hb_005643_020 0.1401182362 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
17 Hb_110562_020 0.1403006764 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
18 Hb_000510_350 0.1429660365 - - Putative polyprotein [Oryza sativa Japonica Group]
19 Hb_044026_010 0.1431584736 - - PREDICTED: cytochrome P450 93A3-like [Jatropha curcas]
20 Hb_001403_070 0.1440365199 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_000473_010 Hb_000473_010 Hb_000699_200 Hb_000699_200 Hb_000473_010--Hb_000699_200 Hb_003683_090 Hb_003683_090 Hb_000473_010--Hb_003683_090 Hb_002193_050 Hb_002193_050 Hb_000473_010--Hb_002193_050 Hb_000890_190 Hb_000890_190 Hb_000473_010--Hb_000890_190 Hb_002290_100 Hb_002290_100 Hb_000473_010--Hb_002290_100 Hb_001511_130 Hb_001511_130 Hb_000473_010--Hb_001511_130 Hb_000699_200--Hb_003683_090 Hb_000699_200--Hb_002193_050 Hb_000699_200--Hb_000890_190 Hb_000699_200--Hb_001511_130 Hb_006124_040 Hb_006124_040 Hb_000699_200--Hb_006124_040 Hb_003683_090--Hb_000890_190 Hb_003683_090--Hb_006124_040 Hb_003683_090--Hb_002193_050 Hb_000510_350 Hb_000510_350 Hb_003683_090--Hb_000510_350 Hb_022630_010 Hb_022630_010 Hb_002193_050--Hb_022630_010 Hb_005648_030 Hb_005648_030 Hb_002193_050--Hb_005648_030 Hb_002193_050--Hb_000890_190 Hb_000890_190--Hb_000510_350 Hb_168039_020 Hb_168039_020 Hb_000890_190--Hb_168039_020 Hb_002290_100--Hb_168039_020 Hb_168436_010 Hb_168436_010 Hb_002290_100--Hb_168436_010 Hb_021409_060 Hb_021409_060 Hb_002290_100--Hb_021409_060 Hb_002127_010 Hb_002127_010 Hb_002290_100--Hb_002127_010 Hb_001268_360 Hb_001268_360 Hb_002290_100--Hb_001268_360 Hb_030312_060 Hb_030312_060 Hb_001511_130--Hb_030312_060 Hb_030469_010 Hb_030469_010 Hb_001511_130--Hb_030469_010 Hb_007264_050 Hb_007264_050 Hb_001511_130--Hb_007264_050 Hb_000172_730 Hb_000172_730 Hb_001511_130--Hb_000172_730
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.25055 0.0219828 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0100168 0

CAGE analysis