Hb_000479_110

Information

Type -
Description -
Location Contig479: 67742-69583
Sequence    

Annotation

kegg
ID rcu:RCOM_0524510
description hypothetical protein
nr
ID XP_012084796.1
description PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Jatropha curcas]
swissprot
ID Q9LIB3
description BAG family molecular chaperone regulator 8, chloroplastic OS=Arabidopsis thaliana GN=BAG1 PE=1 SV=1
trembl
ID A0A067JTF3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19915 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44610: 67750-69679
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000479_110 0.0 - - PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Jatropha curcas]
2 Hb_000599_360 0.0903364332 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
3 Hb_005741_040 0.1103622617 - - PREDICTED: probable receptor-like protein kinase At1g49730 [Jatropha curcas]
4 Hb_000705_180 0.1107896603 - - hypothetical protein JCGZ_02923 [Jatropha curcas]
5 Hb_000111_370 0.116333802 - - PREDICTED: cation/H(+) antiporter 2-like [Jatropha curcas]
6 Hb_000205_280 0.1166381985 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
7 Hb_002603_040 0.1184411153 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
8 Hb_001103_090 0.1204520344 - - PREDICTED: patellin-3 [Populus euphratica]
9 Hb_158845_060 0.1208486967 - - PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
10 Hb_003964_110 0.1211976855 - - PREDICTED: pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Jatropha curcas]
11 Hb_002687_060 0.1243296435 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
12 Hb_001009_150 0.1262447694 - - Glyceraldehyde-3-phosphate dehydrogenase [Gossypium arboreum]
13 Hb_001021_070 0.1272987983 - - unnamed protein product [Vitis vinifera]
14 Hb_000015_200 0.1290893518 - - PREDICTED: LOW QUALITY PROTEIN: heat shock cognate 70 kDa protein 2-like [Jatropha curcas]
15 Hb_009615_160 0.1305710107 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
16 Hb_001226_110 0.1321531839 - - PREDICTED: uncharacterized protein LOC105638106 [Jatropha curcas]
17 Hb_000317_110 0.1321920023 - - PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial isoform X2 [Jatropha curcas]
18 Hb_009372_020 0.1327866086 - - PREDICTED: protein transport protein Sec61 subunit alpha-like [Jatropha curcas]
19 Hb_016734_010 0.1331754059 - - PREDICTED: probable DNA-3-methyladenine glycosylase 2 [Jatropha curcas]
20 Hb_002686_140 0.1337241555 - - PREDICTED: general negative regulator of transcription subunit 3 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000479_110 Hb_000479_110 Hb_000599_360 Hb_000599_360 Hb_000479_110--Hb_000599_360 Hb_005741_040 Hb_005741_040 Hb_000479_110--Hb_005741_040 Hb_000705_180 Hb_000705_180 Hb_000479_110--Hb_000705_180 Hb_000111_370 Hb_000111_370 Hb_000479_110--Hb_000111_370 Hb_000205_280 Hb_000205_280 Hb_000479_110--Hb_000205_280 Hb_002603_040 Hb_002603_040 Hb_000479_110--Hb_002603_040 Hb_158845_060 Hb_158845_060 Hb_000599_360--Hb_158845_060 Hb_021977_010 Hb_021977_010 Hb_000599_360--Hb_021977_010 Hb_003964_110 Hb_003964_110 Hb_000599_360--Hb_003964_110 Hb_160608_010 Hb_160608_010 Hb_000599_360--Hb_160608_010 Hb_000599_360--Hb_005741_040 Hb_080147_050 Hb_080147_050 Hb_000599_360--Hb_080147_050 Hb_000260_400 Hb_000260_400 Hb_005741_040--Hb_000260_400 Hb_002687_180 Hb_002687_180 Hb_005741_040--Hb_002687_180 Hb_013726_050 Hb_013726_050 Hb_005741_040--Hb_013726_050 Hb_002849_050 Hb_002849_050 Hb_005741_040--Hb_002849_050 Hb_000317_110 Hb_000317_110 Hb_005741_040--Hb_000317_110 Hb_003599_030 Hb_003599_030 Hb_000705_180--Hb_003599_030 Hb_009372_020 Hb_009372_020 Hb_000705_180--Hb_009372_020 Hb_004375_110 Hb_004375_110 Hb_000705_180--Hb_004375_110 Hb_001103_090 Hb_001103_090 Hb_000705_180--Hb_001103_090 Hb_001259_120 Hb_001259_120 Hb_000705_180--Hb_001259_120 Hb_028077_020 Hb_028077_020 Hb_000705_180--Hb_028077_020 Hb_000111_370--Hb_009372_020 Hb_033363_010 Hb_033363_010 Hb_000111_370--Hb_033363_010 Hb_000015_200 Hb_000015_200 Hb_000111_370--Hb_000015_200 Hb_000111_370--Hb_004375_110 Hb_000111_370--Hb_003964_110 Hb_004680_010 Hb_004680_010 Hb_000111_370--Hb_004680_010 Hb_000205_280--Hb_001103_090 Hb_000260_780 Hb_000260_780 Hb_000205_280--Hb_000260_780 Hb_001159_030 Hb_001159_030 Hb_000205_280--Hb_001159_030 Hb_000205_280--Hb_158845_060 Hb_000784_080 Hb_000784_080 Hb_000205_280--Hb_000784_080 Hb_000054_040 Hb_000054_040 Hb_000205_280--Hb_000054_040 Hb_000265_140 Hb_000265_140 Hb_002603_040--Hb_000265_140 Hb_002603_040--Hb_000599_360 Hb_002400_060 Hb_002400_060 Hb_002603_040--Hb_002400_060 Hb_000085_260 Hb_000085_260 Hb_002603_040--Hb_000085_260 Hb_001754_020 Hb_001754_020 Hb_002603_040--Hb_001754_020 Hb_000494_030 Hb_000494_030 Hb_002603_040--Hb_000494_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.7091 7.43539 6.78679 9.34115 3.52207 1.73832
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.834687 0.80038 3.60566 7.35815 5.13997

CAGE analysis