Hb_000482_120

Information

Type -
Description -
Location Contig482: 160259-161134
Sequence    

Annotation

kegg
ID rcu:RCOM_0797410
description hypothetical protein
nr
ID XP_012077284.1
description PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCZ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07667 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000482_120 0.0 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
2 Hb_000453_020 0.1195830925 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
3 Hb_000692_100 0.1216807299 - - calcium-dependent protein kinase, putative [Ricinus communis]
4 Hb_003029_120 0.1250676537 - - PREDICTED: uncharacterized protein LOC105642638 [Jatropha curcas]
5 Hb_001855_020 0.1253432236 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
6 Hb_000574_170 0.1326998645 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Jatropha curcas]
7 Hb_010337_040 0.1330500015 - - -
8 Hb_007483_120 0.1421419872 - - 60S ribosomal protein L32A [Hevea brasiliensis]
9 Hb_000599_330 0.1595525026 - - hypothetical protein JCGZ_17661 [Jatropha curcas]
10 Hb_000181_230 0.1622817022 - - copper ion binding protein, putative [Ricinus communis]
11 Hb_150440_010 0.1632930008 - - -
12 Hb_000071_160 0.1662839836 - - PREDICTED: protein IQ-DOMAIN 14 [Jatropha curcas]
13 Hb_002539_050 0.1664444151 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
14 Hb_001946_200 0.1676875593 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
15 Hb_006570_090 0.1708192254 - - tubulin beta chain, putative [Ricinus communis]
16 Hb_004223_240 0.1716460098 - - PREDICTED: uncharacterized protein LOC105635369 [Jatropha curcas]
17 Hb_000429_160 0.1740807012 - - PREDICTED: uncharacterized protein LOC105645177 [Jatropha curcas]
18 Hb_011930_180 0.1745717054 - - conserved hypothetical protein [Ricinus communis]
19 Hb_012539_100 0.1758979433 - - PREDICTED: putative proline-rich receptor-like protein kinase PERK11 [Jatropha curcas]
20 Hb_003702_070 0.1759179748 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_000482_120 Hb_000482_120 Hb_000453_020 Hb_000453_020 Hb_000482_120--Hb_000453_020 Hb_000692_100 Hb_000692_100 Hb_000482_120--Hb_000692_100 Hb_003029_120 Hb_003029_120 Hb_000482_120--Hb_003029_120 Hb_001855_020 Hb_001855_020 Hb_000482_120--Hb_001855_020 Hb_000574_170 Hb_000574_170 Hb_000482_120--Hb_000574_170 Hb_010337_040 Hb_010337_040 Hb_000482_120--Hb_010337_040 Hb_000453_020--Hb_003029_120 Hb_000453_020--Hb_010337_040 Hb_003488_040 Hb_003488_040 Hb_000453_020--Hb_003488_040 Hb_002184_080 Hb_002184_080 Hb_000453_020--Hb_002184_080 Hb_012539_100 Hb_012539_100 Hb_000453_020--Hb_012539_100 Hb_004223_240 Hb_004223_240 Hb_000692_100--Hb_004223_240 Hb_001054_040 Hb_001054_040 Hb_000692_100--Hb_001054_040 Hb_000617_330 Hb_000617_330 Hb_000692_100--Hb_000617_330 Hb_006570_090 Hb_006570_090 Hb_000692_100--Hb_006570_090 Hb_001318_100 Hb_001318_100 Hb_000692_100--Hb_001318_100 Hb_001946_200 Hb_001946_200 Hb_003029_120--Hb_001946_200 Hb_070498_010 Hb_070498_010 Hb_003029_120--Hb_070498_010 Hb_001195_550 Hb_001195_550 Hb_003029_120--Hb_001195_550 Hb_012404_020 Hb_012404_020 Hb_003029_120--Hb_012404_020 Hb_004648_020 Hb_004648_020 Hb_001855_020--Hb_004648_020 Hb_012410_010 Hb_012410_010 Hb_001855_020--Hb_012410_010 Hb_001855_020--Hb_010337_040 Hb_007101_070 Hb_007101_070 Hb_001855_020--Hb_007101_070 Hb_003702_070 Hb_003702_070 Hb_001855_020--Hb_003702_070 Hb_000333_030 Hb_000333_030 Hb_000574_170--Hb_000333_030 Hb_002217_360 Hb_002217_360 Hb_000574_170--Hb_002217_360 Hb_000959_130 Hb_000959_130 Hb_000574_170--Hb_000959_130 Hb_010222_040 Hb_010222_040 Hb_000574_170--Hb_010222_040 Hb_000574_170--Hb_010337_040 Hb_000327_320 Hb_000327_320 Hb_010337_040--Hb_000327_320 Hb_000395_310 Hb_000395_310 Hb_010337_040--Hb_000395_310 Hb_005784_010 Hb_005784_010 Hb_010337_040--Hb_005784_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.104404 3.63001 5.09493 11.8018 1.17069 0.921424
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0859182 1.7499 4.67514

CAGE analysis