Hb_000483_450

Information

Type -
Description -
Location Contig483: 403063-404276
Sequence    

Annotation

kegg
ID rcu:RCOM_0192510
description transferase, putative
nr
ID XP_012070076.1
description PREDICTED: anthranilate N-benzoyltransferase protein 1 [Jatropha curcas]
swissprot
ID Q9LIS1
description Protein ECERIFERUM 26-like OS=Arabidopsis thaliana GN=CER26L PE=2 SV=1
trembl
ID A0A067L609
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03466 PE=4 SV=1
Gene Ontology
ID GO:0016747
description taxadien-5-alpha-ol o-acetyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44843: 402919-404262
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000483_450 0.0 - - PREDICTED: anthranilate N-benzoyltransferase protein 1 [Jatropha curcas]
2 Hb_004202_020 0.0487285887 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004137_040 0.053427533 - - PREDICTED: serine carboxypeptidase-like 42 [Jatropha curcas]
4 Hb_000028_190 0.0542545312 - - PREDICTED: probable inactive receptor kinase At1g48480 [Jatropha curcas]
5 Hb_002221_060 0.0644089891 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
6 Hb_003894_110 0.0690766039 - - PREDICTED: 65-kDa microtubule-associated protein 4 [Jatropha curcas]
7 Hb_000392_110 0.0698681135 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
8 Hb_000003_380 0.0712112706 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003376_020 0.0724563233 - - PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [Jatropha curcas]
10 Hb_152910_050 0.0728068883 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
11 Hb_001021_120 0.0754305516 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-4 [Jatropha curcas]
12 Hb_000928_030 0.0756166876 transcription factor TF Family: bZIP PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
13 Hb_000009_270 0.0765086807 - - Calmodulin, putative [Ricinus communis]
14 Hb_098315_060 0.0781172309 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 7-like [Jatropha curcas]
15 Hb_040852_010 0.079796346 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001545_020 0.0800393992 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X5 [Populus euphratica]
17 Hb_010883_170 0.0801862922 - - PREDICTED: auxin transporter-like protein 3 [Jatropha curcas]
18 Hb_012653_050 0.0806143107 - - hypothetical protein RCOM_0460020 [Ricinus communis]
19 Hb_000103_450 0.0832859035 - - PREDICTED: dentin sialophosphoprotein-like [Jatropha curcas]
20 Hb_001674_010 0.0836158983 - - PREDICTED: reticulon-like protein B21 isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_000483_450 Hb_000483_450 Hb_004202_020 Hb_004202_020 Hb_000483_450--Hb_004202_020 Hb_004137_040 Hb_004137_040 Hb_000483_450--Hb_004137_040 Hb_000028_190 Hb_000028_190 Hb_000483_450--Hb_000028_190 Hb_002221_060 Hb_002221_060 Hb_000483_450--Hb_002221_060 Hb_003894_110 Hb_003894_110 Hb_000483_450--Hb_003894_110 Hb_000392_110 Hb_000392_110 Hb_000483_450--Hb_000392_110 Hb_001047_090 Hb_001047_090 Hb_004202_020--Hb_001047_090 Hb_040852_010 Hb_040852_010 Hb_004202_020--Hb_040852_010 Hb_004202_020--Hb_003894_110 Hb_004202_020--Hb_000392_110 Hb_003376_020 Hb_003376_020 Hb_004202_020--Hb_003376_020 Hb_004137_040--Hb_000028_190 Hb_004137_040--Hb_002221_060 Hb_000928_030 Hb_000928_030 Hb_004137_040--Hb_000928_030 Hb_000230_300 Hb_000230_300 Hb_004137_040--Hb_000230_300 Hb_000103_200 Hb_000103_200 Hb_004137_040--Hb_000103_200 Hb_002150_090 Hb_002150_090 Hb_000028_190--Hb_002150_090 Hb_001674_010 Hb_001674_010 Hb_000028_190--Hb_001674_010 Hb_008054_030 Hb_008054_030 Hb_000028_190--Hb_008054_030 Hb_000028_190--Hb_000928_030 Hb_000003_380 Hb_000003_380 Hb_002221_060--Hb_000003_380 Hb_002221_060--Hb_000230_300 Hb_002221_060--Hb_000103_200 Hb_002221_060--Hb_000928_030 Hb_003894_110--Hb_040852_010 Hb_152910_050 Hb_152910_050 Hb_003894_110--Hb_152910_050 Hb_098315_060 Hb_098315_060 Hb_003894_110--Hb_098315_060 Hb_000134_130 Hb_000134_130 Hb_003894_110--Hb_000134_130 Hb_003894_110--Hb_003376_020 Hb_000878_050 Hb_000878_050 Hb_000392_110--Hb_000878_050 Hb_001117_050 Hb_001117_050 Hb_000392_110--Hb_001117_050 Hb_000392_110--Hb_003894_110 Hb_000392_110--Hb_001047_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.73334 45.3579 66.3669 0 0.0171462
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.40652 36.4714

CAGE analysis