Hb_000487_100

Information

Type -
Description -
Location Contig487: 124062-125710
Sequence    

Annotation

kegg
ID rcu:RCOM_0463560
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012087387.1
description PREDICTED: protein unc-45 homolog A [Jatropha curcas]
swissprot
ID Q32PZ3
description Protein unc-45 homolog A OS=Rattus norvegicus GN=Unc45a PE=2 SV=1
trembl
ID A0A067JQH5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22633 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44995: 124077-126127
cDNA
(Sanger)
(ID:Location)		 033_O02.ab1: 124077-125406 , 038_F17.ab1: 124077-125398

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000487_100 0.0 - - PREDICTED: protein unc-45 homolog A [Jatropha curcas]
2 Hb_003125_060 0.0835222966 - - PREDICTED: snurportin-1 [Jatropha curcas]
3 Hb_080147_030 0.0896537287 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X3 [Jatropha curcas]
4 Hb_000685_080 0.0950050516 - - protein binding protein, putative [Ricinus communis]
5 Hb_005725_020 0.0998090606 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Jatropha curcas]
6 Hb_000740_070 0.1068787729 - - -
7 Hb_005399_020 0.1125708543 - - hypothetical protein CISIN_1g022820mg [Citrus sinensis]
8 Hb_004678_020 0.1158829585 - - PREDICTED: protein YIF1B [Jatropha curcas]
9 Hb_000270_780 0.1163930201 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Jatropha curcas]
10 Hb_000367_290 0.117152022 - - PREDICTED: uncharacterized protein LOC105640583 [Jatropha curcas]
11 Hb_000152_890 0.1172010351 - - hypothetical protein JCGZ_26265 [Jatropha curcas]
12 Hb_002977_010 0.1172074986 - - PREDICTED: F-box protein GID2 [Jatropha curcas]
13 Hb_000116_280 0.1174214423 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
14 Hb_002133_030 0.1175529319 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
15 Hb_005314_010 0.1177077515 - - nucleotide binding protein, putative [Ricinus communis]
16 Hb_001975_020 0.1194504016 - - PREDICTED: uncharacterized protein LOC105637186 [Jatropha curcas]
17 Hb_001616_050 0.1207472873 - - PREDICTED: uncharacterized protein LOC105644363 [Jatropha curcas]
18 Hb_000406_040 0.1208978875 - - PREDICTED: LOW QUALITY PROTEIN: FRIGIDA-like protein 5 [Jatropha curcas]
19 Hb_000997_090 0.1216363558 - - PREDICTED: uncharacterized protein LOC105632095 [Jatropha curcas]
20 Hb_027405_020 0.1234376213 - - PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Jatropha curcas]

Gene co-expression network

sample Hb_000487_100 Hb_000487_100 Hb_003125_060 Hb_003125_060 Hb_000487_100--Hb_003125_060 Hb_080147_030 Hb_080147_030 Hb_000487_100--Hb_080147_030 Hb_000685_080 Hb_000685_080 Hb_000487_100--Hb_000685_080 Hb_005725_020 Hb_005725_020 Hb_000487_100--Hb_005725_020 Hb_000740_070 Hb_000740_070 Hb_000487_100--Hb_000740_070 Hb_005399_020 Hb_005399_020 Hb_000487_100--Hb_005399_020 Hb_002133_030 Hb_002133_030 Hb_003125_060--Hb_002133_030 Hb_003125_060--Hb_000685_080 Hb_027405_020 Hb_027405_020 Hb_003125_060--Hb_027405_020 Hb_023020_060 Hb_023020_060 Hb_003125_060--Hb_023020_060 Hb_007305_010 Hb_007305_010 Hb_003125_060--Hb_007305_010 Hb_003656_160 Hb_003656_160 Hb_080147_030--Hb_003656_160 Hb_010222_080 Hb_010222_080 Hb_080147_030--Hb_010222_080 Hb_004678_020 Hb_004678_020 Hb_080147_030--Hb_004678_020 Hb_001975_020 Hb_001975_020 Hb_080147_030--Hb_001975_020 Hb_080147_030--Hb_000740_070 Hb_009646_050 Hb_009646_050 Hb_000685_080--Hb_009646_050 Hb_000685_080--Hb_005399_020 Hb_000016_280 Hb_000016_280 Hb_000685_080--Hb_000016_280 Hb_002977_010 Hb_002977_010 Hb_000685_080--Hb_002977_010 Hb_000685_080--Hb_002133_030 Hb_005725_020--Hb_080147_030 Hb_005725_020--Hb_003125_060 Hb_000107_530 Hb_000107_530 Hb_005725_020--Hb_000107_530 Hb_000720_070 Hb_000720_070 Hb_005725_020--Hb_000720_070 Hb_000152_890 Hb_000152_890 Hb_005725_020--Hb_000152_890 Hb_001474_030 Hb_001474_030 Hb_000740_070--Hb_001474_030 Hb_000740_070--Hb_003656_160 Hb_005701_040 Hb_005701_040 Hb_000740_070--Hb_005701_040 Hb_001504_150 Hb_001504_150 Hb_000740_070--Hb_001504_150 Hb_000740_070--Hb_004678_020 Hb_007164_020 Hb_007164_020 Hb_000740_070--Hb_007164_020 Hb_000116_280 Hb_000116_280 Hb_005399_020--Hb_000116_280 Hb_012395_160 Hb_012395_160 Hb_005399_020--Hb_012395_160 Hb_005038_020 Hb_005038_020 Hb_005399_020--Hb_005038_020 Hb_000367_290 Hb_000367_290 Hb_005399_020--Hb_000367_290 Hb_148209_020 Hb_148209_020 Hb_005399_020--Hb_148209_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.9307 19.2052 7.70275 4.81626 36.706 20.2983
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.43959 5.88658 16.1438 6.62371 2.07193

CAGE analysis