Hb_000488_030

Information

Type -
Description -
Location Contig488: 27270-40777
Sequence    

Annotation

kegg
ID rcu:RCOM_0731690
description heat-shock protein, putative
nr
ID XP_012068597.1
description PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
swissprot
ID P04793
description 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1
trembl
ID A0A067L124
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02891 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000488_030 0.0 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
2 Hb_006745_020 0.1880425424 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
3 Hb_005730_100 0.1948911195 - - PREDICTED: 18.2 kDa class I heat shock protein-like [Gossypium raimondii]
4 Hb_079297_010 0.2029294884 - - hypothetical protein VITISV_012409 [Vitis vinifera]
5 Hb_000046_220 0.2047980043 - - -
6 Hb_000398_130 0.2048190539 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
7 Hb_029980_010 0.2309287111 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
8 Hb_003337_070 0.2312727357 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
9 Hb_001279_230 0.2353188412 - - PREDICTED: class I heat shock protein-like [Jatropha curcas]
10 Hb_002843_220 0.2403575949 - - PREDICTED: small heat shock protein, chloroplastic [Jatropha curcas]
11 Hb_003647_120 0.2427522518 - - 18.2 kDa class I heat shock family protein [Populus trichocarpa]
12 Hb_000891_080 0.2495165531 - - PREDICTED: TMV resistance protein N-like, partial [Populus euphratica]
13 Hb_000140_370 0.2515471017 - - PREDICTED: BAG family molecular chaperone regulator 6 [Jatropha curcas]
14 Hb_001104_040 0.2542711031 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
15 Hb_001269_560 0.2597723897 - - heat-shock protein 70 [Hevea brasiliensis]
16 Hb_004846_170 0.2619671261 - - heat-shock protein 70 [Hevea brasiliensis]
17 Hb_125948_020 0.2633686573 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
18 Hb_184326_010 0.2722892448 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
19 Hb_025194_030 0.2738703893 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
20 Hb_001235_100 0.2768714891 - - heat-shock protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000488_030 Hb_000488_030 Hb_006745_020 Hb_006745_020 Hb_000488_030--Hb_006745_020 Hb_005730_100 Hb_005730_100 Hb_000488_030--Hb_005730_100 Hb_079297_010 Hb_079297_010 Hb_000488_030--Hb_079297_010 Hb_000046_220 Hb_000046_220 Hb_000488_030--Hb_000046_220 Hb_000398_130 Hb_000398_130 Hb_000488_030--Hb_000398_130 Hb_029980_010 Hb_029980_010 Hb_000488_030--Hb_029980_010 Hb_003337_070 Hb_003337_070 Hb_006745_020--Hb_003337_070 Hb_000853_290 Hb_000853_290 Hb_006745_020--Hb_000853_290 Hb_000205_070 Hb_000205_070 Hb_006745_020--Hb_000205_070 Hb_184326_010 Hb_184326_010 Hb_006745_020--Hb_184326_010 Hb_003647_120 Hb_003647_120 Hb_006745_020--Hb_003647_120 Hb_006745_020--Hb_000398_130 Hb_002890_190 Hb_002890_190 Hb_005730_100--Hb_002890_190 Hb_000891_080 Hb_000891_080 Hb_005730_100--Hb_000891_080 Hb_005730_100--Hb_029980_010 Hb_001104_040 Hb_001104_040 Hb_005730_100--Hb_001104_040 Hb_005730_100--Hb_000398_130 Hb_125948_020 Hb_125948_020 Hb_079297_010--Hb_125948_020 Hb_004846_170 Hb_004846_170 Hb_079297_010--Hb_004846_170 Hb_079297_010--Hb_000046_220 Hb_001269_560 Hb_001269_560 Hb_079297_010--Hb_001269_560 Hb_049827_010 Hb_049827_010 Hb_079297_010--Hb_049827_010 Hb_000046_220--Hb_029980_010 Hb_000046_220--Hb_005730_100 Hb_000046_220--Hb_000891_080 Hb_002843_220 Hb_002843_220 Hb_000046_220--Hb_002843_220 Hb_000398_130--Hb_003647_120 Hb_001279_230 Hb_001279_230 Hb_000398_130--Hb_001279_230 Hb_027255_010 Hb_027255_010 Hb_000398_130--Hb_027255_010 Hb_029980_010--Hb_002890_190 Hb_029980_010--Hb_000891_080 Hb_168893_010 Hb_168893_010 Hb_029980_010--Hb_168893_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.7132 144.8 7.21756 3.72852 298.116 62.8438
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.673471 0.683759 1.36269 0.333129 49.7584

CAGE analysis