Hb_000503_040

Information

Type -
Description -
Location Contig503: 137057-139496
Sequence    

Annotation

kegg
ID rcu:RCOM_0217990
description Leucoanthocyanidin dioxygenase, putative (EC:1.14.11.19)
nr
ID XP_012087843.1
description PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
swissprot
ID P51091
description Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1
trembl
ID A0A067JKC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25005 PE=3 SV=1
Gene Ontology
ID GO:0005506
description leucoanthocyanidin dioxygenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000503_040 0.0 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
2 Hb_001901_090 0.0395779198 - - metal ion binding protein, putative [Ricinus communis]
3 Hb_005614_040 0.0654605849 - - unnamed protein product [Coffea canephora]
4 Hb_007483_040 0.0668374747 - - PREDICTED: protein SRG1-like [Jatropha curcas]
5 Hb_010697_030 0.0704657752 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
6 Hb_000712_070 0.0706629922 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001699_240 0.0748973877 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
8 Hb_009568_010 0.0751187863 - - hypothetical protein POPTR_0001s46700g [Populus trichocarpa]
9 Hb_003253_020 0.0782903179 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
10 Hb_002805_230 0.0800654336 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
11 Hb_003090_070 0.0824847943 - - PREDICTED: laccase-7 [Jatropha curcas]
12 Hb_000446_100 0.0830121097 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
13 Hb_020480_050 0.0850012103 - - putative wall-associated kinase family protein [Populus trichocarpa]
14 Hb_003891_060 0.0858176956 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Glycine max]
15 Hb_005464_040 0.0869564114 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_000513_110 0.0870108502 - - PREDICTED: germin-like protein subfamily 1 member 13 [Populus euphratica]
17 Hb_002818_080 0.0902291609 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA20, putative [Ricinus communis]
18 Hb_001301_020 0.0920445862 - - hypothetical protein JCGZ_06575 [Jatropha curcas]
19 Hb_000141_070 0.0942515134 - - l-lactate dehydrogenase, putative [Ricinus communis]
20 Hb_042664_010 0.0952271574 - - hypothetical protein POPTR_0001s07640g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_000503_040 Hb_000503_040 Hb_001901_090 Hb_001901_090 Hb_000503_040--Hb_001901_090 Hb_005614_040 Hb_005614_040 Hb_000503_040--Hb_005614_040 Hb_007483_040 Hb_007483_040 Hb_000503_040--Hb_007483_040 Hb_010697_030 Hb_010697_030 Hb_000503_040--Hb_010697_030 Hb_000712_070 Hb_000712_070 Hb_000503_040--Hb_000712_070 Hb_001699_240 Hb_001699_240 Hb_000503_040--Hb_001699_240 Hb_003253_020 Hb_003253_020 Hb_001901_090--Hb_003253_020 Hb_042664_010 Hb_042664_010 Hb_001901_090--Hb_042664_010 Hb_000513_110 Hb_000513_110 Hb_001901_090--Hb_000513_110 Hb_005464_040 Hb_005464_040 Hb_001901_090--Hb_005464_040 Hb_003891_060 Hb_003891_060 Hb_001901_090--Hb_003891_060 Hb_005614_040--Hb_007483_040 Hb_000059_100 Hb_000059_100 Hb_005614_040--Hb_000059_100 Hb_009568_010 Hb_009568_010 Hb_005614_040--Hb_009568_010 Hb_005614_040--Hb_001699_240 Hb_185391_010 Hb_185391_010 Hb_005614_040--Hb_185391_010 Hb_007483_040--Hb_010697_030 Hb_020480_050 Hb_020480_050 Hb_007483_040--Hb_020480_050 Hb_007483_040--Hb_009568_010 Hb_000141_070 Hb_000141_070 Hb_007483_040--Hb_000141_070 Hb_003334_080 Hb_003334_080 Hb_007483_040--Hb_003334_080 Hb_007483_040--Hb_000712_070 Hb_010697_030--Hb_020480_050 Hb_000836_400 Hb_000836_400 Hb_010697_030--Hb_000836_400 Hb_010697_030--Hb_000141_070 Hb_010697_030--Hb_009568_010 Hb_002805_230 Hb_002805_230 Hb_000712_070--Hb_002805_230 Hb_003090_070 Hb_003090_070 Hb_000712_070--Hb_003090_070 Hb_000712_070--Hb_000141_070 Hb_000712_070--Hb_003334_080 Hb_004693_010 Hb_004693_010 Hb_000712_070--Hb_004693_010 Hb_002818_080 Hb_002818_080 Hb_001699_240--Hb_002818_080 Hb_001699_240--Hb_002805_230 Hb_001699_240--Hb_007483_040 Hb_001699_240--Hb_000712_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0759491 0.0800878 0.085051 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.22977 0

CAGE analysis