Hb_000504_220

Information

Type -
Description -
Location Contig504: 252140-260872
Sequence    

Annotation

kegg
ID pop:POPTR_0015s09850g
description POPTRDRAFT_88450; hypothetical protein
nr
ID KDP46409.1
description hypothetical protein JCGZ_10249 [Jatropha curcas]
swissprot
ID Q9VHP4
description Probable cytochrome P450 313b1 OS=Drosophila melanogaster GN=Cyp313b1 PE=2 SV=2
trembl
ID A0A067LPG0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10249 PE=4 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 86b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000504_220 0.0 - - hypothetical protein JCGZ_10249 [Jatropha curcas]
2 Hb_001089_120 0.0266244668 - - PREDICTED: pectinesterase [Jatropha curcas]
3 Hb_000530_060 0.0393579375 - - -
4 Hb_043327_010 0.0506533251 - - PREDICTED: uncharacterized protein LOC105785093, partial [Gossypium raimondii]
5 Hb_003805_110 0.0561776513 - - PREDICTED: laccase-11-like [Jatropha curcas]
6 Hb_029584_020 0.0588309287 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005171_020 0.0592152992 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
8 Hb_000608_160 0.0600488414 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
9 Hb_001140_110 0.0612105828 - - hypothetical protein JCGZ_26123 [Jatropha curcas]
10 Hb_003058_150 0.0652175474 - - PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Jatropha curcas]
11 Hb_183479_030 0.0697755179 - - Photosystem I reaction center subunit V, chloroplast precursor, putative [Ricinus communis]
12 Hb_001080_290 0.0723268637 - - PSI reaction center subunit II [Citrus sinensis]
13 Hb_000940_120 0.0723656838 - - PREDICTED: proline-rich protein 4-like isoform X2 [Pyrus x bretschneideri]
14 Hb_004818_010 0.074222483 - - hypothetical protein JCGZ_13628 [Jatropha curcas]
15 Hb_003093_050 0.0752765857 - - PREDICTED: uncharacterized protein LOC105641023 isoform X2 [Jatropha curcas]
16 Hb_006272_010 0.0754235471 - - PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
17 Hb_003251_010 0.0756165158 - - hypothetical protein MIMGU_mgv1a025126mg [Erythranthe guttata]
18 Hb_001951_050 0.0763695755 - - chlorophyll A/B binding protein, putative [Ricinus communis]
19 Hb_002997_060 0.0798373056 - - hypothetical protein POPTR_0011s10730g [Populus trichocarpa]
20 Hb_007594_020 0.0842807765 - - hypothetical protein JCGZ_18350 [Jatropha curcas]

Gene co-expression network

sample Hb_000504_220 Hb_000504_220 Hb_001089_120 Hb_001089_120 Hb_000504_220--Hb_001089_120 Hb_000530_060 Hb_000530_060 Hb_000504_220--Hb_000530_060 Hb_043327_010 Hb_043327_010 Hb_000504_220--Hb_043327_010 Hb_003805_110 Hb_003805_110 Hb_000504_220--Hb_003805_110 Hb_029584_020 Hb_029584_020 Hb_000504_220--Hb_029584_020 Hb_005171_020 Hb_005171_020 Hb_000504_220--Hb_005171_020 Hb_001089_120--Hb_000530_060 Hb_001089_120--Hb_029584_020 Hb_000608_160 Hb_000608_160 Hb_001089_120--Hb_000608_160 Hb_003251_010 Hb_003251_010 Hb_001089_120--Hb_003251_010 Hb_001089_120--Hb_003805_110 Hb_000530_060--Hb_029584_020 Hb_000530_060--Hb_003805_110 Hb_003093_050 Hb_003093_050 Hb_000530_060--Hb_003093_050 Hb_004818_010 Hb_004818_010 Hb_000530_060--Hb_004818_010 Hb_043327_010--Hb_005171_020 Hb_006272_010 Hb_006272_010 Hb_043327_010--Hb_006272_010 Hb_002997_060 Hb_002997_060 Hb_043327_010--Hb_002997_060 Hb_001715_050 Hb_001715_050 Hb_043327_010--Hb_001715_050 Hb_183479_030 Hb_183479_030 Hb_043327_010--Hb_183479_030 Hb_003805_110--Hb_029584_020 Hb_003058_150 Hb_003058_150 Hb_003805_110--Hb_003058_150 Hb_001140_110 Hb_001140_110 Hb_003805_110--Hb_001140_110 Hb_001097_110 Hb_001097_110 Hb_003805_110--Hb_001097_110 Hb_081344_010 Hb_081344_010 Hb_003805_110--Hb_081344_010 Hb_029584_020--Hb_081344_010 Hb_000433_040 Hb_000433_040 Hb_029584_020--Hb_000433_040 Hb_000152_300 Hb_000152_300 Hb_029584_020--Hb_000152_300 Hb_010666_020 Hb_010666_020 Hb_029584_020--Hb_010666_020 Hb_005171_020--Hb_006272_010 Hb_005171_020--Hb_001715_050 Hb_005171_020--Hb_002997_060 Hb_083242_040 Hb_083242_040 Hb_005171_020--Hb_083242_040 Hb_003228_060 Hb_003228_060 Hb_005171_020--Hb_003228_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0599266 0.076732 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.563142

CAGE analysis