Hb_000505_010

Information

Type -
Description -
Location Contig505: 10152-14434
Sequence    

Annotation

kegg
ID rcu:RCOM_0934420
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012081138.1
description PREDICTED: uncharacterized protein LOC105641242 [Jatropha curcas]
swissprot
ID Q91Z38
description Tetratricopeptide repeat protein 1 OS=Mus musculus GN=Ttc1 PE=2 SV=1
trembl
ID A0A067K5D5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16990 PE=4 SV=1
Gene Ontology
ID GO:0005515
description heat shock protein 70 -interacting

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45987: 10188-10315 , PASA_asmbl_45988: 10558-11216 , PASA_asmbl_45990: 11239-14414
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000505_010 0.0 - - PREDICTED: uncharacterized protein LOC105641242 [Jatropha curcas]
2 Hb_001396_180 0.0957331928 - - PREDICTED: uncharacterized protein LOC105644834 [Jatropha curcas]
3 Hb_011316_040 0.0972614728 - - peptidase, putative [Ricinus communis]
4 Hb_000236_070 0.0993082282 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003376_040 0.1013597758 - - PREDICTED: uncharacterized protein LOC105642177 [Jatropha curcas]
6 Hb_000096_090 0.1071473827 - - hypothetical protein JCGZ_12551 [Jatropha curcas]
7 Hb_116349_100 0.1082561433 rubber biosynthesis Gene Name: Phosphomevalonate kinase phosphomevalonate kinase [Hevea brasiliensis]
8 Hb_001959_070 0.108892156 - - PREDICTED: uncharacterized protein LOC105638451 isoform X1 [Jatropha curcas]
9 Hb_000316_050 0.1119726212 - - enoyl-ACP reductase [Vernicia fordii]
10 Hb_000345_390 0.1119985717 - - hypothetical protein JCGZ_23349 [Jatropha curcas]
11 Hb_007672_050 0.1121994468 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
12 Hb_000648_110 0.1140840466 - - PREDICTED: D-xylose-proton symporter-like 3, chloroplastic [Jatropha curcas]
13 Hb_002205_070 0.1146545697 - - PREDICTED: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1 [Jatropha curcas]
14 Hb_112798_030 0.1157207527 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003020_020 0.1160926399 - - PREDICTED: dnaJ homolog subfamily B member 8 isoform X1 [Jatropha curcas]
16 Hb_001053_180 0.1161088514 - - protein binding protein, putative [Ricinus communis]
17 Hb_001100_060 0.1170162202 - - glycoprotein 3-alpha-l-fucosyltransferase A, putative [Ricinus communis]
18 Hb_006541_030 0.118654264 - - PREDICTED: uncharacterized protein LOC105628287 [Jatropha curcas]
19 Hb_000069_110 0.1186789886 - - PREDICTED: nephrocystin-3-like isoform X2 [Jatropha curcas]
20 Hb_017904_010 0.1188038153 - - PREDICTED: DNA repair protein recA homolog 2, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000505_010 Hb_000505_010 Hb_001396_180 Hb_001396_180 Hb_000505_010--Hb_001396_180 Hb_011316_040 Hb_011316_040 Hb_000505_010--Hb_011316_040 Hb_000236_070 Hb_000236_070 Hb_000505_010--Hb_000236_070 Hb_003376_040 Hb_003376_040 Hb_000505_010--Hb_003376_040 Hb_000096_090 Hb_000096_090 Hb_000505_010--Hb_000096_090 Hb_116349_100 Hb_116349_100 Hb_000505_010--Hb_116349_100 Hb_001360_040 Hb_001360_040 Hb_001396_180--Hb_001360_040 Hb_001396_180--Hb_003376_040 Hb_005539_350 Hb_005539_350 Hb_001396_180--Hb_005539_350 Hb_001269_680 Hb_001269_680 Hb_001396_180--Hb_001269_680 Hb_153112_020 Hb_153112_020 Hb_001396_180--Hb_153112_020 Hb_001396_180--Hb_000096_090 Hb_001277_330 Hb_001277_330 Hb_011316_040--Hb_001277_330 Hb_011316_040--Hb_000236_070 Hb_006541_030 Hb_006541_030 Hb_011316_040--Hb_006541_030 Hb_000648_110 Hb_000648_110 Hb_011316_040--Hb_000648_110 Hb_000206_210 Hb_000206_210 Hb_011316_040--Hb_000206_210 Hb_000928_210 Hb_000928_210 Hb_011316_040--Hb_000928_210 Hb_002205_070 Hb_002205_070 Hb_000236_070--Hb_002205_070 Hb_024185_020 Hb_024185_020 Hb_000236_070--Hb_024185_020 Hb_000107_620 Hb_000107_620 Hb_000236_070--Hb_000107_620 Hb_000236_070--Hb_000648_110 Hb_009838_080 Hb_009838_080 Hb_000236_070--Hb_009838_080 Hb_003929_160 Hb_003929_160 Hb_003376_040--Hb_003929_160 Hb_007380_070 Hb_007380_070 Hb_003376_040--Hb_007380_070 Hb_007908_020 Hb_007908_020 Hb_003376_040--Hb_007908_020 Hb_001862_190 Hb_001862_190 Hb_003376_040--Hb_001862_190 Hb_003376_040--Hb_000096_090 Hb_000096_090--Hb_000648_110 Hb_001053_180 Hb_001053_180 Hb_000096_090--Hb_001053_180 Hb_000316_050 Hb_000316_050 Hb_000096_090--Hb_000316_050 Hb_003732_020 Hb_003732_020 Hb_000096_090--Hb_003732_020 Hb_000345_390 Hb_000345_390 Hb_116349_100--Hb_000345_390 Hb_116349_100--Hb_001053_180 Hb_003020_020 Hb_003020_020 Hb_116349_100--Hb_003020_020 Hb_001959_070 Hb_001959_070 Hb_116349_100--Hb_001959_070 Hb_116349_100--Hb_000096_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.5406 2.63048 6.75521 3.94416 8.99677 13.1265
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.4914 12.9283 17.3718 2.05733 9.13095

CAGE analysis