Hb_000505_030

Information

Type -
Description -
Location Contig505: 24864-25274
Sequence    

Annotation

kegg
ID rcu:RCOM_1186830
description hypothetical protein
nr
ID XP_002527458.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SN89
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1186830 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000505_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002079_100 0.0535666808 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
3 Hb_000731_030 0.0666317032 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
4 Hb_007558_060 0.0768664722 - - PREDICTED: uncharacterized protein LOC105644482 [Jatropha curcas]
5 Hb_000152_200 0.0808647303 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2 isoform X1 [Jatropha curcas]
6 Hb_001680_060 0.0822192395 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001519_080 0.0829530168 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
8 Hb_004881_040 0.0931206437 - - PREDICTED: protodermal factor 1-like [Populus euphratica]
9 Hb_008642_020 0.0942088162 - - sterol desaturase, putative [Ricinus communis]
10 Hb_000544_150 0.0960788176 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 1 [Jatropha curcas]
11 Hb_005550_060 0.0996163366 transcription factor TF Family: MYB-related transcription factor, putative [Ricinus communis]
12 Hb_002447_060 0.0997941007 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
13 Hb_000005_390 0.1046567085 - - hypothetical protein JCGZ_04862 [Jatropha curcas]
14 Hb_007741_010 0.1078332461 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 1 [Jatropha curcas]
15 Hb_177533_010 0.10867848 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
16 Hb_000005_160 0.1096948431 - - tonoplast intrinsic protein, putative [Ricinus communis]
17 Hb_005170_050 0.1104289146 - - PREDICTED: double-stranded RNA-binding protein 2-like [Populus euphratica]
18 Hb_000816_080 0.1133734182 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
19 Hb_002045_020 0.1134863161 transcription factor TF Family: AUX/IAA auxin-induced protein aux28 [Populus trichocarpa]
20 Hb_002376_020 0.1138274134 - - lectin, partial [Lathyrus palustris]

Gene co-expression network

sample Hb_000505_030 Hb_000505_030 Hb_002079_100 Hb_002079_100 Hb_000505_030--Hb_002079_100 Hb_000731_030 Hb_000731_030 Hb_000505_030--Hb_000731_030 Hb_007558_060 Hb_007558_060 Hb_000505_030--Hb_007558_060 Hb_000152_200 Hb_000152_200 Hb_000505_030--Hb_000152_200 Hb_001680_060 Hb_001680_060 Hb_000505_030--Hb_001680_060 Hb_001519_080 Hb_001519_080 Hb_000505_030--Hb_001519_080 Hb_002447_060 Hb_002447_060 Hb_002079_100--Hb_002447_060 Hb_002079_100--Hb_007558_060 Hb_002079_100--Hb_000731_030 Hb_012633_010 Hb_012633_010 Hb_002079_100--Hb_012633_010 Hb_000816_080 Hb_000816_080 Hb_002079_100--Hb_000816_080 Hb_000731_030--Hb_000152_200 Hb_006909_050 Hb_006909_050 Hb_000731_030--Hb_006909_050 Hb_000731_030--Hb_001519_080 Hb_000731_030--Hb_007558_060 Hb_008642_020 Hb_008642_020 Hb_007558_060--Hb_008642_020 Hb_000563_110 Hb_000563_110 Hb_007558_060--Hb_000563_110 Hb_007558_060--Hb_001519_080 Hb_000005_390 Hb_000005_390 Hb_007558_060--Hb_000005_390 Hb_005170_050 Hb_005170_050 Hb_007558_060--Hb_005170_050 Hb_005550_060 Hb_005550_060 Hb_007558_060--Hb_005550_060 Hb_000005_160 Hb_000005_160 Hb_000152_200--Hb_000005_160 Hb_177533_010 Hb_177533_010 Hb_000152_200--Hb_177533_010 Hb_007741_010 Hb_007741_010 Hb_000152_200--Hb_007741_010 Hb_000544_150 Hb_000544_150 Hb_000152_200--Hb_000544_150 Hb_000556_050 Hb_000556_050 Hb_000152_200--Hb_000556_050 Hb_005198_010 Hb_005198_010 Hb_000152_200--Hb_005198_010 Hb_005854_060 Hb_005854_060 Hb_001680_060--Hb_005854_060 Hb_008252_010 Hb_008252_010 Hb_001680_060--Hb_008252_010 Hb_162008_040 Hb_162008_040 Hb_001680_060--Hb_162008_040 Hb_002376_020 Hb_002376_020 Hb_001680_060--Hb_002376_020 Hb_162008_020 Hb_162008_020 Hb_001680_060--Hb_162008_020 Hb_007157_050 Hb_007157_050 Hb_001680_060--Hb_007157_050 Hb_001519_080--Hb_008642_020 Hb_001519_080--Hb_005170_050 Hb_001519_080--Hb_005550_060 Hb_001519_080--Hb_000005_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.139827 6.78079 0.518549 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.263634

CAGE analysis