Hb_000510_190

Information

Type -
Description -
Location Contig510: 174685-182698
Sequence    

Annotation

kegg
ID rcu:RCOM_0992190
description glutathione reductase, putative (EC:1.8.1.7)
nr
ID AIL54982.1
description glutathione reductase [Hevea brasiliensis]
swissprot
ID P80461
description Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1
trembl
ID A0A077ETE4
description Glutathione reductase OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0005739
description glutathione chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46291: 175894-182616 , PASA_asmbl_46292: 178662-179059
cDNA
(Sanger)
(ID:Location)		 002_E13.ab1: 175894-177075 , 042_J24.ab1: 178035-182471 , 047_K21.ab1: 178035-182497

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000510_190 0.0 - - glutathione reductase [Hevea brasiliensis]
2 Hb_000487_370 0.0708785033 - - -
3 Hb_000414_080 0.0734281558 - - PREDICTED: triosephosphate isomerase, chloroplastic [Jatropha curcas]
4 Hb_002828_060 0.0794156276 - - PREDICTED: probable phytol kinase 3, chloroplastic [Jatropha curcas]
5 Hb_002249_080 0.0806538969 - - lysosomal alpha-mannosidase, putative [Ricinus communis]
6 Hb_009296_020 0.0845119007 desease resistance Gene Name: ATP-synt_ab_N PREDICTED: ATP synthase subunit beta, mitochondrial-like [Jatropha curcas]
7 Hb_003490_060 0.0845641194 - - PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X2 [Sesamum indicum]
8 Hb_001117_110 0.0882631028 - - PREDICTED: dynamin-2A [Jatropha curcas]
9 Hb_001143_100 0.0886473924 - - PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Populus euphratica]
10 Hb_068804_090 0.0894294433 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
11 Hb_004629_030 0.0906003412 - - ABC transporter family protein [Hevea brasiliensis]
12 Hb_003355_010 0.09243685 - - Heat shock 70 kDa protein, putative [Ricinus communis]
13 Hb_001425_010 0.0943010956 - - sugar transporter, putative [Ricinus communis]
14 Hb_002150_020 0.0945189052 - - PREDICTED: translation initiation factor IF-2, mitochondrial isoform X1 [Jatropha curcas]
15 Hb_106890_010 0.0951042874 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
16 Hb_002010_090 0.0956674306 - - PREDICTED: aminomethyltransferase, mitochondrial [Jatropha curcas]
17 Hb_001439_070 0.0959984381 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
18 Hb_005571_010 0.0963104803 - - PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Jatropha curcas]
19 Hb_001865_100 0.0963842989 - - PREDICTED: ACT domain-containing protein ACR9 [Jatropha curcas]
20 Hb_032631_070 0.0967151098 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000510_190 Hb_000510_190 Hb_000487_370 Hb_000487_370 Hb_000510_190--Hb_000487_370 Hb_000414_080 Hb_000414_080 Hb_000510_190--Hb_000414_080 Hb_002828_060 Hb_002828_060 Hb_000510_190--Hb_002828_060 Hb_002249_080 Hb_002249_080 Hb_000510_190--Hb_002249_080 Hb_009296_020 Hb_009296_020 Hb_000510_190--Hb_009296_020 Hb_003490_060 Hb_003490_060 Hb_000510_190--Hb_003490_060 Hb_000487_370--Hb_000414_080 Hb_000594_060 Hb_000594_060 Hb_000487_370--Hb_000594_060 Hb_004052_110 Hb_004052_110 Hb_000487_370--Hb_004052_110 Hb_001059_060 Hb_001059_060 Hb_000487_370--Hb_001059_060 Hb_000487_370--Hb_002249_080 Hb_000414_080--Hb_002249_080 Hb_000422_080 Hb_000422_080 Hb_000414_080--Hb_000422_080 Hb_003175_070 Hb_003175_070 Hb_000414_080--Hb_003175_070 Hb_002374_450 Hb_002374_450 Hb_000414_080--Hb_002374_450 Hb_002828_060--Hb_003490_060 Hb_068079_010 Hb_068079_010 Hb_002828_060--Hb_068079_010 Hb_000482_050 Hb_000482_050 Hb_002828_060--Hb_000482_050 Hb_002828_060--Hb_002249_080 Hb_001140_180 Hb_001140_180 Hb_002828_060--Hb_001140_180 Hb_000585_110 Hb_000585_110 Hb_002249_080--Hb_000585_110 Hb_006916_050 Hb_006916_050 Hb_002249_080--Hb_006916_050 Hb_000007_090 Hb_000007_090 Hb_002249_080--Hb_000007_090 Hb_015884_020 Hb_015884_020 Hb_002249_080--Hb_015884_020 Hb_003680_220 Hb_003680_220 Hb_009296_020--Hb_003680_220 Hb_000230_530 Hb_000230_530 Hb_009296_020--Hb_000230_530 Hb_005854_040 Hb_005854_040 Hb_009296_020--Hb_005854_040 Hb_002687_200 Hb_002687_200 Hb_009296_020--Hb_002687_200 Hb_001677_100 Hb_001677_100 Hb_009296_020--Hb_001677_100 Hb_106890_010 Hb_106890_010 Hb_003490_060--Hb_106890_010 Hb_000976_110 Hb_000976_110 Hb_003490_060--Hb_000976_110 Hb_002392_020 Hb_002392_020 Hb_003490_060--Hb_002392_020 Hb_000109_260 Hb_000109_260 Hb_003490_060--Hb_000109_260 Hb_003355_010 Hb_003355_010 Hb_003490_060--Hb_003355_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.56797 22.5728 39.0958 31.1536 8.6546 7.60444
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.7188 8.68314 7.87884 26.4256 52.7341

CAGE analysis