Hb_000512_030

Information

Type -
Description -
Location Contig512: 12761-21914
Sequence    

Annotation

kegg
ID rcu:RCOM_0725620
description wall-associated kinase, putative (EC:2.7.10.2)
nr
ID XP_002524904.1
description wall-associated kinase, putative [Ricinus communis]
swissprot
ID P0C5E2
description Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=2 SV=2
trembl
ID B9SFY5
description Wall-associated kinase, putative OS=Ricinus communis GN=RCOM_0725620 PE=3 SV=1
Gene Ontology
ID GO:0004672
description probable serine threonine-protein kinase at1g18390 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46365: 15659-15876 , PASA_asmbl_46366: 17760-18144
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000512_030 0.0 - - wall-associated kinase, putative [Ricinus communis]
2 Hb_003895_040 0.0906992506 - - hypothetical protein CISIN_1g0006512mg, partial [Citrus sinensis]
3 Hb_002027_190 0.101424077 - - PREDICTED: autophagy-related protein 18g [Jatropha curcas]
4 Hb_000679_210 0.10505812 - - grr1, plant, putative [Ricinus communis]
5 Hb_000571_160 0.1067755411 - - PREDICTED: ubiquitin-activating enzyme E1 1-like [Jatropha curcas]
6 Hb_014497_020 0.1069818807 - - PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Jatropha curcas]
7 Hb_000631_110 0.1085648107 - - PREDICTED: activating signal cointegrator 1 complex subunit 3 [Jatropha curcas]
8 Hb_007576_210 0.111384873 - - PREDICTED: protein furry homolog [Jatropha curcas]
9 Hb_000105_030 0.1117772194 - - fkbp-rapamycin associated protein, putative [Ricinus communis]
10 Hb_000175_120 0.1138933551 - - PREDICTED: pre-mRNA-processing-splicing factor 8 [Jatropha curcas]
11 Hb_000574_530 0.1140521166 - - PREDICTED: pre-mRNA-processing-splicing factor 8 [Jatropha curcas]
12 Hb_007632_010 0.116269552 - - PREDICTED: E3 ubiquitin-protein ligase UPL1 isoform X1 [Jatropha curcas]
13 Hb_000940_150 0.1170061979 - - PREDICTED: uncharacterized protein LOC105643779 [Jatropha curcas]
14 Hb_006907_140 0.1204881159 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000321_090 0.1206695107 - - PREDICTED: calcium-transporting ATPase 1, endoplasmic reticulum-type-like [Jatropha curcas]
16 Hb_001781_020 0.1216101149 - - PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
17 Hb_003211_040 0.1250361905 - - PREDICTED: uncharacterized protein LOC105634664 isoform X1 [Jatropha curcas]
18 Hb_002631_200 0.1271758649 - - PREDICTED: uncharacterized protein LOC105646171 isoform X2 [Jatropha curcas]
19 Hb_003216_090 0.1275944375 - - PREDICTED: nuclear pore complex protein NUP133 isoform X1 [Jatropha curcas]
20 Hb_000080_110 0.128438369 - - PREDICTED: GPI ethanolamine phosphate transferase 3 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000512_030 Hb_000512_030 Hb_003895_040 Hb_003895_040 Hb_000512_030--Hb_003895_040 Hb_002027_190 Hb_002027_190 Hb_000512_030--Hb_002027_190 Hb_000679_210 Hb_000679_210 Hb_000512_030--Hb_000679_210 Hb_000571_160 Hb_000571_160 Hb_000512_030--Hb_000571_160 Hb_014497_020 Hb_014497_020 Hb_000512_030--Hb_014497_020 Hb_000631_110 Hb_000631_110 Hb_000512_030--Hb_000631_110 Hb_003895_040--Hb_014497_020 Hb_001054_120 Hb_001054_120 Hb_003895_040--Hb_001054_120 Hb_007576_210 Hb_007576_210 Hb_003895_040--Hb_007576_210 Hb_001124_050 Hb_001124_050 Hb_003895_040--Hb_001124_050 Hb_007120_060 Hb_007120_060 Hb_003895_040--Hb_007120_060 Hb_000321_090 Hb_000321_090 Hb_002027_190--Hb_000321_090 Hb_002851_010 Hb_002851_010 Hb_002027_190--Hb_002851_010 Hb_000080_110 Hb_000080_110 Hb_002027_190--Hb_000080_110 Hb_020805_180 Hb_020805_180 Hb_002027_190--Hb_020805_180 Hb_033799_010 Hb_033799_010 Hb_002027_190--Hb_033799_010 Hb_007747_170 Hb_007747_170 Hb_002027_190--Hb_007747_170 Hb_000679_210--Hb_000571_160 Hb_011861_080 Hb_011861_080 Hb_000679_210--Hb_011861_080 Hb_002631_200 Hb_002631_200 Hb_000679_210--Hb_002631_200 Hb_134279_010 Hb_134279_010 Hb_000679_210--Hb_134279_010 Hb_000789_240 Hb_000789_240 Hb_000679_210--Hb_000789_240 Hb_000049_150 Hb_000049_150 Hb_000571_160--Hb_000049_150 Hb_004109_380 Hb_004109_380 Hb_000571_160--Hb_004109_380 Hb_010809_010 Hb_010809_010 Hb_000571_160--Hb_010809_010 Hb_006907_140 Hb_006907_140 Hb_000571_160--Hb_006907_140 Hb_000571_160--Hb_007576_210 Hb_011828_030 Hb_011828_030 Hb_000571_160--Hb_011828_030 Hb_014497_020--Hb_007576_210 Hb_014497_020--Hb_001124_050 Hb_003211_040 Hb_003211_040 Hb_014497_020--Hb_003211_040 Hb_001662_180 Hb_001662_180 Hb_014497_020--Hb_001662_180 Hb_009486_170 Hb_009486_170 Hb_014497_020--Hb_009486_170 Hb_000940_150 Hb_000940_150 Hb_000631_110--Hb_000940_150 Hb_000175_120 Hb_000175_120 Hb_000631_110--Hb_000175_120 Hb_000083_270 Hb_000083_270 Hb_000631_110--Hb_000083_270 Hb_000105_030 Hb_000105_030 Hb_000631_110--Hb_000105_030 Hb_002005_080 Hb_002005_080 Hb_000631_110--Hb_002005_080 Hb_185830_070 Hb_185830_070 Hb_000631_110--Hb_185830_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.85057 6.14413 1.80616 3.34332 3.33005 2.16997
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.599724 0.451429 2.61444 6.81226 4.53919

CAGE analysis