Hb_000513_080

Information

Type -
Description -
Location Contig513: 48694-56701
Sequence    

Annotation

kegg
ID rcu:RCOM_1095700
description hypothetical protein
nr
ID XP_012083269.1
description PREDICTED: putative cysteine-rich receptor-like protein kinase 43 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9SF99
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1095700 PE=4 SV=1
Gene Ontology
ID GO:0004672
description cysteine-rich receptor-like protein kinase 43

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000513_080 0.0 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 43 [Jatropha curcas]
2 Hb_000189_060 0.0545548477 - - PREDICTED: uncharacterized protein LOC105637477 [Jatropha curcas]
3 Hb_087008_010 0.2325706772 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
4 Hb_004640_040 0.2334190294 - - -
5 Hb_134312_010 0.2350683155 - - PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Populus euphratica]
6 Hb_071379_010 0.2516423375 - - PREDICTED: mitogen-activated protein kinase kinase kinase 3-like [Nelumbo nucifera]
7 Hb_000123_100 0.2891349874 - - Uncharacterized protein TCM_024608 [Theobroma cacao]
8 Hb_005743_090 0.2912752466 - - -
9 Hb_167364_020 0.3015549167 - - -
10 Hb_059301_010 0.3066655431 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
11 Hb_028848_030 0.3153133812 - - -
12 Hb_045481_010 0.3401607715 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
13 Hb_000866_360 0.3484995737 - - -
14 Hb_104812_020 0.3486343061 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
15 Hb_109358_010 0.3618171193 - - -
16 Hb_113823_010 0.3676746542 - - -
17 Hb_004524_070 0.3679260494 - - PREDICTED: uncharacterized protein LOC105634656 [Jatropha curcas]
18 Hb_001959_230 0.3741767362 - - PREDICTED: uncharacterized protein LOC105638436 [Jatropha curcas]
19 Hb_174245_020 0.3743341507 - - -
20 Hb_113444_010 0.374420136 - - -

Gene co-expression network

sample Hb_000513_080 Hb_000513_080 Hb_000189_060 Hb_000189_060 Hb_000513_080--Hb_000189_060 Hb_087008_010 Hb_087008_010 Hb_000513_080--Hb_087008_010 Hb_004640_040 Hb_004640_040 Hb_000513_080--Hb_004640_040 Hb_134312_010 Hb_134312_010 Hb_000513_080--Hb_134312_010 Hb_071379_010 Hb_071379_010 Hb_000513_080--Hb_071379_010 Hb_000123_100 Hb_000123_100 Hb_000513_080--Hb_000123_100 Hb_000189_060--Hb_004640_040 Hb_000189_060--Hb_134312_010 Hb_000189_060--Hb_087008_010 Hb_000189_060--Hb_071379_010 Hb_005743_090 Hb_005743_090 Hb_000189_060--Hb_005743_090 Hb_087008_010--Hb_134312_010 Hb_087008_010--Hb_004640_040 Hb_005892_070 Hb_005892_070 Hb_087008_010--Hb_005892_070 Hb_087008_010--Hb_000123_100 Hb_004640_040--Hb_134312_010 Hb_004640_040--Hb_000123_100 Hb_004640_040--Hb_005892_070 Hb_134312_010--Hb_000123_100 Hb_134312_010--Hb_005892_070 Hb_006973_060 Hb_006973_060 Hb_071379_010--Hb_006973_060 Hb_059301_010 Hb_059301_010 Hb_071379_010--Hb_059301_010 Hb_000723_070 Hb_000723_070 Hb_071379_010--Hb_000723_070 Hb_045481_010 Hb_045481_010 Hb_071379_010--Hb_045481_010 Hb_113823_010 Hb_113823_010 Hb_000123_100--Hb_113823_010 Hb_000123_100--Hb_059301_010 Hb_160233_020 Hb_160233_020 Hb_000123_100--Hb_160233_020 Hb_004800_050 Hb_004800_050 Hb_000123_100--Hb_004800_050 Hb_001214_170 Hb_001214_170 Hb_000123_100--Hb_001214_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0383185 0 0.0459326 0 0.0285855 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis