Hb_000521_020

Information

Type -
Description -
Location Contig521: 13882-15294
Sequence    

Annotation

kegg
ID vvi:100257965
description uncharacterized LOC100257965
nr
ID XP_012092587.1
description PREDICTED: uncharacterized protein LOC105650319 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067J9E6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05255 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000521_020 0.0 - - PREDICTED: uncharacterized protein LOC105650319 [Jatropha curcas]
2 Hb_000421_120 0.1024791444 - - PREDICTED: NEDD8-specific protease 1 [Jatropha curcas]
3 Hb_164010_060 0.1029149128 - - PREDICTED: uncharacterized protein LOC105633115 [Jatropha curcas]
4 Hb_000352_090 0.1034966589 - - PREDICTED: syntaxin-22-like isoform X1 [Jatropha curcas]
5 Hb_000521_260 0.1039956498 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Jatropha curcas]
6 Hb_086063_010 0.1109532925 - - soluble diacylglycerol acyltransferase [Ricinus communis]
7 Hb_063716_080 0.1121193995 - - DNA-directed RNA polymerase III subunit F, putative [Ricinus communis]
8 Hb_004586_180 0.113275968 - - hypothetical protein JCGZ_15866 [Jatropha curcas]
9 Hb_008511_030 0.1137757287 - - guanine nucleotide-binding protein beta, putative [Ricinus communis]
10 Hb_075481_030 0.1140702793 - - PREDICTED: DNA-binding protein RHL1 isoform X3 [Jatropha curcas]
11 Hb_031091_010 0.1142769191 - - crooked neck protein, putative [Ricinus communis]
12 Hb_002960_160 0.1166338604 - - PREDICTED: vacuolar protein sorting-associated protein 35B isoform X2 [Jatropha curcas]
13 Hb_001829_010 0.117060545 - - PREDICTED: general transcription factor 3C polypeptide 3-like isoform X2 [Jatropha curcas]
14 Hb_033095_020 0.1179819981 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000866_030 0.117999755 - - hypothetical protein RCOM_1615820 [Ricinus communis]
16 Hb_000640_020 0.1193644567 - - PREDICTED: probable dimethyladenosine transferase [Jatropha curcas]
17 Hb_000645_150 0.1195146253 - - zinc finger protein, putative [Ricinus communis]
18 Hb_000008_330 0.1210422733 - - 60S ribosomal protein L12A [Hevea brasiliensis]
19 Hb_003581_120 0.1215481638 - - PREDICTED: uncharacterized protein LOC105649777 [Jatropha curcas]
20 Hb_003020_110 0.121641239 - - PREDICTED: serine/arginine repetitive matrix protein 1 isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_000521_020 Hb_000521_020 Hb_000421_120 Hb_000421_120 Hb_000521_020--Hb_000421_120 Hb_164010_060 Hb_164010_060 Hb_000521_020--Hb_164010_060 Hb_000352_090 Hb_000352_090 Hb_000521_020--Hb_000352_090 Hb_000521_260 Hb_000521_260 Hb_000521_020--Hb_000521_260 Hb_086063_010 Hb_086063_010 Hb_000521_020--Hb_086063_010 Hb_063716_080 Hb_063716_080 Hb_000521_020--Hb_063716_080 Hb_000224_060 Hb_000224_060 Hb_000421_120--Hb_000224_060 Hb_002813_010 Hb_002813_010 Hb_000421_120--Hb_002813_010 Hb_000046_010 Hb_000046_010 Hb_000421_120--Hb_000046_010 Hb_000865_080 Hb_000865_080 Hb_000421_120--Hb_000865_080 Hb_076693_020 Hb_076693_020 Hb_000421_120--Hb_076693_020 Hb_001168_040 Hb_001168_040 Hb_000421_120--Hb_001168_040 Hb_003020_110 Hb_003020_110 Hb_164010_060--Hb_003020_110 Hb_004586_180 Hb_004586_180 Hb_164010_060--Hb_004586_180 Hb_006586_050 Hb_006586_050 Hb_164010_060--Hb_006586_050 Hb_007590_080 Hb_007590_080 Hb_164010_060--Hb_007590_080 Hb_007632_020 Hb_007632_020 Hb_164010_060--Hb_007632_020 Hb_164010_060--Hb_063716_080 Hb_000352_090--Hb_000521_260 Hb_001829_010 Hb_001829_010 Hb_000352_090--Hb_001829_010 Hb_005307_030 Hb_005307_030 Hb_000352_090--Hb_005307_030 Hb_031091_010 Hb_031091_010 Hb_000352_090--Hb_031091_010 Hb_008714_020 Hb_008714_020 Hb_000352_090--Hb_008714_020 Hb_011612_010 Hb_011612_010 Hb_000352_090--Hb_011612_010 Hb_075481_030 Hb_075481_030 Hb_000521_260--Hb_075481_030 Hb_000768_110 Hb_000768_110 Hb_000521_260--Hb_000768_110 Hb_000521_260--Hb_006586_050 Hb_000510_310 Hb_000510_310 Hb_000521_260--Hb_000510_310 Hb_008511_030 Hb_008511_030 Hb_000521_260--Hb_008511_030 Hb_000976_320 Hb_000976_320 Hb_000521_260--Hb_000976_320 Hb_086063_010--Hb_164010_060 Hb_086063_010--Hb_031091_010 Hb_033095_020 Hb_033095_020 Hb_086063_010--Hb_033095_020 Hb_000032_620 Hb_000032_620 Hb_086063_010--Hb_000032_620 Hb_000798_060 Hb_000798_060 Hb_086063_010--Hb_000798_060 Hb_086063_010--Hb_001168_040 Hb_003641_060 Hb_003641_060 Hb_063716_080--Hb_003641_060 Hb_002960_160 Hb_002960_160 Hb_063716_080--Hb_002960_160 Hb_002255_030 Hb_002255_030 Hb_063716_080--Hb_002255_030 Hb_012180_050 Hb_012180_050 Hb_063716_080--Hb_012180_050 Hb_080313_010 Hb_080313_010 Hb_063716_080--Hb_080313_010 Hb_003935_030 Hb_003935_030 Hb_063716_080--Hb_003935_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.47554 3.09266 0.752103 2.24428 4.04927 4.67655
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.04682 3.1814 1.06043 1.6173 0.785878

CAGE analysis