Hb_000521_180

Information

Type -
Description -
Location Contig521: 128522-129085
Sequence    

Annotation

kegg
ID rcu:RCOM_1773300
description protein binding protein, putative
nr
ID XP_012092607.1
description PREDICTED: uncharacterized protein LOC105650335 [Jatropha curcas]
swissprot
ID Q7Y0E8
description Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica GN=Os03g0405500 PE=2 SV=1
trembl
ID A0A067J9F4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05269 PE=4 SV=1
Gene Ontology
ID GO:0005634
description cysteine histidine-rich c1 domain-containing protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000521_180 0.0 - - PREDICTED: uncharacterized protein LOC105650335 [Jatropha curcas]
2 Hb_013834_010 0.192348458 - - PREDICTED: kinesin-like protein NACK2 [Jatropha curcas]
3 Hb_004495_010 0.1929339207 - - PREDICTED: thioredoxin reductase NTRC [Sesamum indicum]
4 Hb_002325_030 0.2089676453 - - PREDICTED: glucan endo-1,3-beta-glucosidase 2 [Jatropha curcas]
5 Hb_000134_030 0.2093275662 - - PREDICTED: sister chromatid cohesion 1 protein 3-like [Jatropha curcas]
6 Hb_000260_610 0.2120756158 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
7 Hb_002400_050 0.2126846495 - - PREDICTED: uncharacterized protein LOC105637632 isoform X1 [Jatropha curcas]
8 Hb_126648_010 0.2178248774 - - PREDICTED: vacuolar protein-sorting-associated protein 33 homolog [Jatropha curcas]
9 Hb_000172_490 0.2262325166 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
10 Hb_014497_030 0.2267933188 - - PREDICTED: mitotic spindle checkpoint protein BUBR1 [Jatropha curcas]
11 Hb_002518_200 0.2289140194 - - Proliferating cell nuclear antigen [Theobroma cacao]
12 Hb_008250_020 0.2293733829 - - PREDICTED: U-box domain-containing protein 15-like isoform X1 [Jatropha curcas]
13 Hb_124951_010 0.2350755045 - - chitinase-like protein [Hevea brasiliensis]
14 Hb_000003_740 0.2360183983 - - PREDICTED: uncharacterized protein LOC105631539 [Jatropha curcas]
15 Hb_013344_010 0.2373542358 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
16 Hb_034310_010 0.2386336183 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
17 Hb_102437_010 0.2390994599 - - PREDICTED: B-cell receptor-associated protein 31 [Beta vulgaris subsp. vulgaris]
18 Hb_011609_040 0.2429959713 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 40 [Jatropha curcas]
19 Hb_007894_100 0.2448301519 - - PREDICTED: uncharacterized protein LOC105632952 [Jatropha curcas]
20 Hb_183192_010 0.2451548998 - - PREDICTED: thioredoxin reductase NTRC [Sesamum indicum]

Gene co-expression network

sample Hb_000521_180 Hb_000521_180 Hb_013834_010 Hb_013834_010 Hb_000521_180--Hb_013834_010 Hb_004495_010 Hb_004495_010 Hb_000521_180--Hb_004495_010 Hb_002325_030 Hb_002325_030 Hb_000521_180--Hb_002325_030 Hb_000134_030 Hb_000134_030 Hb_000521_180--Hb_000134_030 Hb_000260_610 Hb_000260_610 Hb_000521_180--Hb_000260_610 Hb_002400_050 Hb_002400_050 Hb_000521_180--Hb_002400_050 Hb_013834_010--Hb_002400_050 Hb_001135_110 Hb_001135_110 Hb_013834_010--Hb_001135_110 Hb_000959_190 Hb_000959_190 Hb_013834_010--Hb_000959_190 Hb_004920_050 Hb_004920_050 Hb_013834_010--Hb_004920_050 Hb_013344_010 Hb_013344_010 Hb_013834_010--Hb_013344_010 Hb_000732_030 Hb_000732_030 Hb_013834_010--Hb_000732_030 Hb_183192_010 Hb_183192_010 Hb_004495_010--Hb_183192_010 Hb_123475_020 Hb_123475_020 Hb_004495_010--Hb_123475_020 Hb_065755_020 Hb_065755_020 Hb_004495_010--Hb_065755_020 Hb_074184_010 Hb_074184_010 Hb_004495_010--Hb_074184_010 Hb_009979_010 Hb_009979_010 Hb_004495_010--Hb_009979_010 Hb_011485_030 Hb_011485_030 Hb_002325_030--Hb_011485_030 Hb_002325_030--Hb_004920_050 Hb_000397_140 Hb_000397_140 Hb_002325_030--Hb_000397_140 Hb_002325_030--Hb_013834_010 Hb_126648_010 Hb_126648_010 Hb_002325_030--Hb_126648_010 Hb_008250_020 Hb_008250_020 Hb_002325_030--Hb_008250_020 Hb_008173_060 Hb_008173_060 Hb_000134_030--Hb_008173_060 Hb_000134_030--Hb_002400_050 Hb_124951_010 Hb_124951_010 Hb_000134_030--Hb_124951_010 Hb_002518_200 Hb_002518_200 Hb_000134_030--Hb_002518_200 Hb_000134_030--Hb_000260_610 Hb_000890_020 Hb_000890_020 Hb_000134_030--Hb_000890_020 Hb_000260_610--Hb_013344_010 Hb_006060_010 Hb_006060_010 Hb_000260_610--Hb_006060_010 Hb_007545_110 Hb_007545_110 Hb_000260_610--Hb_007545_110 Hb_000260_610--Hb_002400_050 Hb_003667_020 Hb_003667_020 Hb_000260_610--Hb_003667_020 Hb_000260_610--Hb_004920_050 Hb_002400_050--Hb_000890_020 Hb_002400_050--Hb_007545_110 Hb_002400_050--Hb_002518_200 Hb_000181_270 Hb_000181_270 Hb_002400_050--Hb_000181_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.190517 0.560499 1.84864 0.558126 0.134278 0.278811
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.11087 0 0 0.179352 0

CAGE analysis