Hb_000521_210

Information

Type transcription factor
Description TF Family: HB
Location Contig521: 160694-162405
Sequence    

Annotation

kegg
ID rcu:RCOM_1773230
description homeobox protein, putative
nr
ID XP_002512174.1
description homeobox protein, putative [Ricinus communis]
swissprot
ID P46665
description Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3
trembl
ID B9REK5
description Homeobox protein, putative OS=Ricinus communis GN=RCOM_1773230 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox-leucine zipper protein hox11-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000521_210 0.0 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
2 Hb_000101_140 0.0847306211 - - amino acid transporter, putative [Ricinus communis]
3 Hb_084127_010 0.0877461954 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_000856_240 0.0897837568 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
5 Hb_000579_220 0.093774109 - - transcription factor, putative [Ricinus communis]
6 Hb_000152_250 0.0987282357 - - PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
7 Hb_000907_120 0.0988044859 transcription factor TF Family: G2-like PREDICTED: transcription repressor KAN1-like [Populus euphratica]
8 Hb_007237_090 0.0999773217 - - conserved hypothetical protein [Ricinus communis]
9 Hb_015473_010 0.105095094 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
10 Hb_002968_010 0.1059773996 - - PREDICTED: pectinesterase [Jatropha curcas]
11 Hb_020648_020 0.1086301695 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
12 Hb_002410_010 0.1113800867 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
13 Hb_000172_010 0.114242301 - - PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1 [Populus euphratica]
14 Hb_006615_190 0.1182429766 - - UDP-glycosyltransferase 1 [Linum usitatissimum]
15 Hb_000656_370 0.1199438806 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
16 Hb_006615_180 0.1203455381 - - hypothetical protein B456_003G103400 [Gossypium raimondii]
17 Hb_002248_090 0.1208742249 - - metallothionein 3-like protein [Hevea brasiliensis]
18 Hb_060237_010 0.1228669167 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001073_060 0.1232902882 - - phosphate transporter 1 [Hevea brasiliensis]
20 Hb_005147_020 0.1277911693 - - PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]

Gene co-expression network

sample Hb_000521_210 Hb_000521_210 Hb_000101_140 Hb_000101_140 Hb_000521_210--Hb_000101_140 Hb_084127_010 Hb_084127_010 Hb_000521_210--Hb_084127_010 Hb_000856_240 Hb_000856_240 Hb_000521_210--Hb_000856_240 Hb_000579_220 Hb_000579_220 Hb_000521_210--Hb_000579_220 Hb_000152_250 Hb_000152_250 Hb_000521_210--Hb_000152_250 Hb_000907_120 Hb_000907_120 Hb_000521_210--Hb_000907_120 Hb_000656_370 Hb_000656_370 Hb_000101_140--Hb_000656_370 Hb_000723_060 Hb_000723_060 Hb_000101_140--Hb_000723_060 Hb_002239_030 Hb_002239_030 Hb_000101_140--Hb_002239_030 Hb_002968_010 Hb_002968_010 Hb_000101_140--Hb_002968_010 Hb_006615_180 Hb_006615_180 Hb_000101_140--Hb_006615_180 Hb_007237_090 Hb_007237_090 Hb_084127_010--Hb_007237_090 Hb_084127_010--Hb_000579_220 Hb_006615_190 Hb_006615_190 Hb_084127_010--Hb_006615_190 Hb_074312_020 Hb_074312_020 Hb_084127_010--Hb_074312_020 Hb_020648_020 Hb_020648_020 Hb_084127_010--Hb_020648_020 Hb_149056_010 Hb_149056_010 Hb_000856_240--Hb_149056_010 Hb_000255_020 Hb_000255_020 Hb_000856_240--Hb_000255_020 Hb_001073_060 Hb_001073_060 Hb_000856_240--Hb_001073_060 Hb_000856_240--Hb_000579_220 Hb_135811_060 Hb_135811_060 Hb_000856_240--Hb_135811_060 Hb_000579_220--Hb_007237_090 Hb_000579_220--Hb_006615_190 Hb_000172_010 Hb_000172_010 Hb_000579_220--Hb_000172_010 Hb_000579_220--Hb_020648_020 Hb_015473_010 Hb_015473_010 Hb_000152_250--Hb_015473_010 Hb_000152_250--Hb_000907_120 Hb_002735_010 Hb_002735_010 Hb_000152_250--Hb_002735_010 Hb_003439_090 Hb_003439_090 Hb_000152_250--Hb_003439_090 Hb_006020_010 Hb_006020_010 Hb_000152_250--Hb_006020_010 Hb_008406_020 Hb_008406_020 Hb_000907_120--Hb_008406_020 Hb_000907_120--Hb_006020_010 Hb_006364_020 Hb_006364_020 Hb_000907_120--Hb_006364_020 Hb_000111_190 Hb_000111_190 Hb_000907_120--Hb_000111_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0707483 12.005 1.11952 4.93073 0 0.0131166
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.76745 1.00627

CAGE analysis