Hb_000521_250

Information

Type -
Description -
Location Contig521: 185848-191507
Sequence    

Annotation

kegg
ID pop:POPTR_0009s02820g
description POPTRDRAFT_821582; N-terminal asparagine amidohydrolase family protein
nr
ID XP_012092611.1
description PREDICTED: protein N-terminal asparagine amidohydrolase isoform X2 [Jatropha curcas]
swissprot
ID Q96AB6
description Protein N-terminal asparagine amidohydrolase OS=Homo sapiens GN=NTAN1 PE=1 SV=3
trembl
ID A0A067JK52
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05273 PE=4 SV=1
Gene Ontology
ID GO:0016787
description protein n-terminal asparagine amidohydrolase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46718: 187942-188584 , PASA_asmbl_46719: 189513-189908 , PASA_asmbl_46720: 190319-190804
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000521_250 0.0 - - PREDICTED: protein N-terminal asparagine amidohydrolase isoform X2 [Jatropha curcas]
2 Hb_000708_030 0.0632541616 - - PREDICTED: uncharacterized protein LOC105650742 [Jatropha curcas]
3 Hb_000212_230 0.070765783 - - PREDICTED: endoribonuclease Dicer homolog 2 [Jatropha curcas]
4 Hb_002414_050 0.0716456762 - - hypothetical protein CICLE_v10000243mg [Citrus clementina]
5 Hb_000138_100 0.0719450896 - - bifunctional purine biosynthesis protein, putative [Ricinus communis]
6 Hb_003680_120 0.0726523778 - - PREDICTED: E3 ubiquitin-protein ligase UPL7 [Jatropha curcas]
7 Hb_003883_060 0.0756255762 transcription factor TF Family: BSD PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Jatropha curcas]
8 Hb_005730_040 0.0773955039 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
9 Hb_004846_220 0.0776501896 - - PREDICTED: probable protein phosphatase 2C 11 isoform X1 [Jatropha curcas]
10 Hb_004452_110 0.078404441 - - PREDICTED: uncharacterized protein LOC105639575 isoform X1 [Jatropha curcas]
11 Hb_013726_090 0.0788694874 - - PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Jatropha curcas]
12 Hb_003544_160 0.0805623831 - - -
13 Hb_000797_040 0.0811869045 - - PREDICTED: uncharacterized protein LOC105645914 [Jatropha curcas]
14 Hb_000352_310 0.0821082531 - - hypothetical protein CISIN_1g0017891mg, partial [Citrus sinensis]
15 Hb_000347_430 0.0835568083 - - PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-A [Jatropha curcas]
16 Hb_002110_190 0.0841318403 - - PREDICTED: pentatricopeptide repeat-containing protein At5g27460 [Jatropha curcas]
17 Hb_002496_010 0.084641473 - - PREDICTED: protein GDAP2 homolog isoform X1 [Jatropha curcas]
18 Hb_023371_020 0.085091533 - - PREDICTED: uncharacterized protein LOC105633512 [Jatropha curcas]
19 Hb_000665_100 0.0851354601 - - PREDICTED: neurochondrin [Jatropha curcas]
20 Hb_003517_040 0.0861104211 - - PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000521_250 Hb_000521_250 Hb_000708_030 Hb_000708_030 Hb_000521_250--Hb_000708_030 Hb_000212_230 Hb_000212_230 Hb_000521_250--Hb_000212_230 Hb_002414_050 Hb_002414_050 Hb_000521_250--Hb_002414_050 Hb_000138_100 Hb_000138_100 Hb_000521_250--Hb_000138_100 Hb_003680_120 Hb_003680_120 Hb_000521_250--Hb_003680_120 Hb_003883_060 Hb_003883_060 Hb_000521_250--Hb_003883_060 Hb_006831_140 Hb_006831_140 Hb_000708_030--Hb_006831_140 Hb_000708_030--Hb_003680_120 Hb_000699_030 Hb_000699_030 Hb_000708_030--Hb_000699_030 Hb_000327_270 Hb_000327_270 Hb_000708_030--Hb_000327_270 Hb_005730_040 Hb_005730_040 Hb_000708_030--Hb_005730_040 Hb_093458_040 Hb_093458_040 Hb_000708_030--Hb_093458_040 Hb_003581_200 Hb_003581_200 Hb_000212_230--Hb_003581_200 Hb_000016_210 Hb_000016_210 Hb_000212_230--Hb_000016_210 Hb_005588_080 Hb_005588_080 Hb_000212_230--Hb_005588_080 Hb_006913_020 Hb_006913_020 Hb_000212_230--Hb_006913_020 Hb_010863_050 Hb_010863_050 Hb_000212_230--Hb_010863_050 Hb_001662_100 Hb_001662_100 Hb_002414_050--Hb_001662_100 Hb_003544_160 Hb_003544_160 Hb_002414_050--Hb_003544_160 Hb_000022_020 Hb_000022_020 Hb_002414_050--Hb_000022_020 Hb_003517_040 Hb_003517_040 Hb_002414_050--Hb_003517_040 Hb_004452_110 Hb_004452_110 Hb_002414_050--Hb_004452_110 Hb_056691_060 Hb_056691_060 Hb_002414_050--Hb_056691_060 Hb_004846_220 Hb_004846_220 Hb_000138_100--Hb_004846_220 Hb_002263_020 Hb_002263_020 Hb_000138_100--Hb_002263_020 Hb_004254_090 Hb_004254_090 Hb_000138_100--Hb_004254_090 Hb_000053_040 Hb_000053_040 Hb_000138_100--Hb_000053_040 Hb_000406_200 Hb_000406_200 Hb_000138_100--Hb_000406_200 Hb_000138_100--Hb_003517_040 Hb_003680_120--Hb_000327_270 Hb_000665_100 Hb_000665_100 Hb_003680_120--Hb_000665_100 Hb_002110_190 Hb_002110_190 Hb_003680_120--Hb_002110_190 Hb_011037_030 Hb_011037_030 Hb_003680_120--Hb_011037_030 Hb_003680_120--Hb_005730_040 Hb_001301_150 Hb_001301_150 Hb_003883_060--Hb_001301_150 Hb_013726_090 Hb_013726_090 Hb_003883_060--Hb_013726_090 Hb_004705_170 Hb_004705_170 Hb_003883_060--Hb_004705_170 Hb_000976_140 Hb_000976_140 Hb_003883_060--Hb_000976_140 Hb_003883_060--Hb_003581_200 Hb_000167_010 Hb_000167_010 Hb_003883_060--Hb_000167_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.78335 3.53318 3.97659 4.87292 3.22638 4.63922
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.62661 3.29859 3.57365 4.33875 6.03862

CAGE analysis