Hb_000521_300

Information

Type -
Description -
Location Contig521: 214845-232074
Sequence    

Annotation

kegg
ID pmum:103330557
description G-type lectin S-receptor-like serine/threonine-protein kinase RLK1
nr
ID XP_012092618.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
swissprot
ID Q39202
description G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2
trembl
ID A0A067J9H0
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_05280 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase rlk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46728: 213873-215806
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000521_300 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
2 Hb_001252_040 0.0982079024 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
3 Hb_000086_370 0.1084512795 - - Long-chain-alcohol oxidase FAO2 [Triticum urartu]
4 Hb_000088_160 0.1333204232 - - PREDICTED: uncharacterized protein LOC105629775 [Jatropha curcas]
5 Hb_001373_010 0.1461382161 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
6 Hb_011214_140 0.1479849692 - - Ran GTPase binding protein, putative [Ricinus communis]
7 Hb_004195_190 0.1484438906 - - WD-repeat protein, putative [Ricinus communis]
8 Hb_007618_010 0.1551612326 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
9 Hb_007709_010 0.1555538105 - - -
10 Hb_001514_210 0.1563483439 - - hypothetical protein VITISV_012133 [Vitis vinifera]
11 Hb_004195_170 0.1595324079 - - ATP binding protein, putative [Ricinus communis]
12 Hb_000657_030 0.1600074468 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
13 Hb_000976_060 0.1602657409 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
14 Hb_003106_210 0.1607166382 - - PREDICTED: UDP-glycosyltransferase 74B1-like [Jatropha curcas]
15 Hb_000876_050 0.1609013912 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
16 Hb_004218_160 0.1609726426 - - NBS-LRR type disease resistance protein [Medicago truncatula]
17 Hb_000679_240 0.1611696537 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
18 Hb_000120_980 0.1617344049 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
19 Hb_000221_170 0.1622629516 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
20 Hb_001454_160 0.1629287512 - - PREDICTED: translocase of chloroplast 159, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000521_300 Hb_000521_300 Hb_001252_040 Hb_001252_040 Hb_000521_300--Hb_001252_040 Hb_000086_370 Hb_000086_370 Hb_000521_300--Hb_000086_370 Hb_000088_160 Hb_000088_160 Hb_000521_300--Hb_000088_160 Hb_001373_010 Hb_001373_010 Hb_000521_300--Hb_001373_010 Hb_011214_140 Hb_011214_140 Hb_000521_300--Hb_011214_140 Hb_004195_190 Hb_004195_190 Hb_000521_300--Hb_004195_190 Hb_001252_040--Hb_000086_370 Hb_001514_210 Hb_001514_210 Hb_001252_040--Hb_001514_210 Hb_000579_180 Hb_000579_180 Hb_001252_040--Hb_000579_180 Hb_012753_200 Hb_012753_200 Hb_001252_040--Hb_012753_200 Hb_001623_470 Hb_001623_470 Hb_001252_040--Hb_001623_470 Hb_000657_030 Hb_000657_030 Hb_000086_370--Hb_000657_030 Hb_004195_170 Hb_004195_170 Hb_000086_370--Hb_004195_170 Hb_000120_980 Hb_000120_980 Hb_000086_370--Hb_000120_980 Hb_000589_180 Hb_000589_180 Hb_000086_370--Hb_000589_180 Hb_012807_060 Hb_012807_060 Hb_000086_370--Hb_012807_060 Hb_007618_010 Hb_007618_010 Hb_000088_160--Hb_007618_010 Hb_133636_010 Hb_133636_010 Hb_000088_160--Hb_133636_010 Hb_002783_320 Hb_002783_320 Hb_000088_160--Hb_002783_320 Hb_001454_340 Hb_001454_340 Hb_000088_160--Hb_001454_340 Hb_164010_090 Hb_164010_090 Hb_000088_160--Hb_164010_090 Hb_117168_010 Hb_117168_010 Hb_001373_010--Hb_117168_010 Hb_002218_070 Hb_002218_070 Hb_001373_010--Hb_002218_070 Hb_004218_160 Hb_004218_160 Hb_001373_010--Hb_004218_160 Hb_007919_040 Hb_007919_040 Hb_001373_010--Hb_007919_040 Hb_057079_020 Hb_057079_020 Hb_001373_010--Hb_057079_020 Hb_001009_110 Hb_001009_110 Hb_011214_140--Hb_001009_110 Hb_000030_260 Hb_000030_260 Hb_011214_140--Hb_000030_260 Hb_000343_260 Hb_000343_260 Hb_011214_140--Hb_000343_260 Hb_011214_140--Hb_000086_370 Hb_006501_170 Hb_006501_170 Hb_011214_140--Hb_006501_170 Hb_002555_020 Hb_002555_020 Hb_004195_190--Hb_002555_020 Hb_001454_160 Hb_001454_160 Hb_004195_190--Hb_001454_160 Hb_001489_030 Hb_001489_030 Hb_004195_190--Hb_001489_030 Hb_004619_010 Hb_004619_010 Hb_004195_190--Hb_004619_010 Hb_000679_240 Hb_000679_240 Hb_004195_190--Hb_000679_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0529926 3.68505 0.337168 0.511488 0.0516008 0.201939
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0483728 0.0444144 0.0855602 3.91876 0.791231

CAGE analysis