Hb_000523_030

Information

Type -
Description -
Location Contig523: 71442-72023
Sequence    

Annotation

kegg
ID rcu:RCOM_0509420
description hypothetical protein
nr
ID XP_012083549.1
description PREDICTED: uncharacterized protein LOC105643073 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LHU8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07980 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46895: 71373-72247
cDNA
(Sanger)
(ID:Location)		 021_G15.ab1: 71377-72115 , 021_J03.ab1: 71373-72147 , 034_M03.ab1: 71377-72117

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000523_030 0.0 - - PREDICTED: uncharacterized protein LOC105643073 [Jatropha curcas]
2 Hb_000395_040 0.0996943702 - - PREDICTED: uncharacterized protein LOC105645576 [Jatropha curcas]
3 Hb_003777_130 0.1038242354 - - PREDICTED: uncharacterized protein LOC105640939 [Jatropha curcas]
4 Hb_000671_030 0.1038471739 - - PREDICTED: probable pectin methyltransferase QUA2 [Jatropha curcas]
5 Hb_000203_270 0.1058880069 - - alpha-xylosidase, putative [Ricinus communis]
6 Hb_000608_280 0.1158675724 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
7 Hb_000258_420 0.1160831962 - - sucrose transporter 2A [Hevea brasiliensis]
8 Hb_000890_030 0.1230580234 - - plastid CUL1 [Hevea brasiliensis]
9 Hb_000815_310 0.123725025 - - protein kinase, putative [Ricinus communis]
10 Hb_007919_110 0.1239760343 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
11 Hb_011930_100 0.1246179587 - - PREDICTED: dnaJ homolog subfamily B member 1 [Jatropha curcas]
12 Hb_000045_160 0.1248766121 - - PREDICTED: glycosyltransferase family 64 protein C4 [Jatropha curcas]
13 Hb_002250_050 0.1250671299 - - PREDICTED: uncharacterized protein LOC105638972 [Jatropha curcas]
14 Hb_003090_160 0.1257617007 - - -
15 Hb_001135_030 0.1257943405 - - PREDICTED: interaptin-like [Jatropha curcas]
16 Hb_001369_780 0.1262915543 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000805_210 0.1266762008 - - PREDICTED: oxysterol-binding protein-related protein 3C-like [Jatropha curcas]
18 Hb_003849_220 0.1278407526 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
19 Hb_000035_050 0.1283206584 - - PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas]
20 Hb_001754_060 0.1285945538 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000523_030 Hb_000523_030 Hb_000395_040 Hb_000395_040 Hb_000523_030--Hb_000395_040 Hb_003777_130 Hb_003777_130 Hb_000523_030--Hb_003777_130 Hb_000671_030 Hb_000671_030 Hb_000523_030--Hb_000671_030 Hb_000203_270 Hb_000203_270 Hb_000523_030--Hb_000203_270 Hb_000608_280 Hb_000608_280 Hb_000523_030--Hb_000608_280 Hb_000258_420 Hb_000258_420 Hb_000523_030--Hb_000258_420 Hb_001691_040 Hb_001691_040 Hb_000395_040--Hb_001691_040 Hb_005535_080 Hb_005535_080 Hb_000395_040--Hb_005535_080 Hb_000815_240 Hb_000815_240 Hb_000395_040--Hb_000815_240 Hb_005381_020 Hb_005381_020 Hb_000395_040--Hb_005381_020 Hb_000890_030 Hb_000890_030 Hb_000395_040--Hb_000890_030 Hb_003777_130--Hb_000258_420 Hb_000815_310 Hb_000815_310 Hb_003777_130--Hb_000815_310 Hb_004375_110 Hb_004375_110 Hb_003777_130--Hb_004375_110 Hb_033152_090 Hb_033152_090 Hb_003777_130--Hb_033152_090 Hb_003777_130--Hb_000671_030 Hb_000640_190 Hb_000640_190 Hb_003777_130--Hb_000640_190 Hb_012760_030 Hb_012760_030 Hb_000671_030--Hb_012760_030 Hb_003849_220 Hb_003849_220 Hb_000671_030--Hb_003849_220 Hb_001623_110 Hb_001623_110 Hb_000671_030--Hb_001623_110 Hb_017948_030 Hb_017948_030 Hb_000671_030--Hb_017948_030 Hb_007919_110 Hb_007919_110 Hb_000671_030--Hb_007919_110 Hb_004987_020 Hb_004987_020 Hb_000203_270--Hb_004987_020 Hb_002849_070 Hb_002849_070 Hb_000203_270--Hb_002849_070 Hb_002739_120 Hb_002739_120 Hb_000203_270--Hb_002739_120 Hb_000200_170 Hb_000200_170 Hb_000203_270--Hb_000200_170 Hb_001135_030 Hb_001135_030 Hb_000203_270--Hb_001135_030 Hb_003599_030 Hb_003599_030 Hb_000203_270--Hb_003599_030 Hb_001369_780 Hb_001369_780 Hb_000608_280--Hb_001369_780 Hb_000134_340 Hb_000134_340 Hb_000608_280--Hb_000134_340 Hb_001009_090 Hb_001009_090 Hb_000608_280--Hb_001009_090 Hb_004917_040 Hb_004917_040 Hb_000608_280--Hb_004917_040 Hb_001376_010 Hb_001376_010 Hb_000608_280--Hb_001376_010 Hb_002248_130 Hb_002248_130 Hb_000608_280--Hb_002248_130 Hb_000258_420--Hb_033152_090 Hb_001699_010 Hb_001699_010 Hb_000258_420--Hb_001699_010 Hb_002272_240 Hb_002272_240 Hb_000258_420--Hb_002272_240 Hb_000680_120 Hb_000680_120 Hb_000258_420--Hb_000680_120 Hb_004531_150 Hb_004531_150 Hb_000258_420--Hb_004531_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
137.321 383.926 321.859 475.146 91.7964 110.124
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
60.3503 93.9406 52.634 104.769 147.62

CAGE analysis