Hb_000526_050

Information

Type -
Description -
Location Contig526: 39125-46307
Sequence    

Annotation

kegg
ID rcu:RCOM_1526580
description chaperone protein DNAj, putative
nr
ID XP_012065513.1
description PREDICTED: chaperone protein dnaJ 1, mitochondrial [Jatropha curcas]
swissprot
ID Q38813
description Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2
trembl
ID A0A067LFX4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16717 PE=3 SV=1
Gene Ontology
ID GO:0005524
description chaperone protein dnaj mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46990: 42996-43112 , PASA_asmbl_46991: 39339-44757 , PASA_asmbl_46992: 45142-46027
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000526_050 0.0 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial [Jatropha curcas]
2 Hb_001579_320 0.0647894563 - - pyroglutamyl-peptidase I, putative [Ricinus communis]
3 Hb_005098_010 0.0748746392 - - PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Jatropha curcas]
4 Hb_007594_130 0.0752688442 - - PREDICTED: lysophospholipid acyltransferase LPEAT2 isoform X1 [Jatropha curcas]
5 Hb_040262_010 0.0756051003 - - PREDICTED: aspartate carbamoyltransferase 1, chloroplastic [Jatropha curcas]
6 Hb_004881_020 0.078695345 - - PREDICTED: serine/threonine-protein kinase rio2-like [Jatropha curcas]
7 Hb_003375_070 0.0837252872 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
8 Hb_003952_070 0.083834754 - - ubiquitin-protein ligase, putative [Ricinus communis]
9 Hb_000260_170 0.0840529434 - - PREDICTED: putative zinc transporter At3g08650 [Cucumis sativus]
10 Hb_001946_010 0.084418951 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
11 Hb_000085_150 0.0852874574 - - PREDICTED: putative BPI/LBP family protein At1g04970 [Jatropha curcas]
12 Hb_103012_010 0.085569954 - - PREDICTED: uncharacterized protein LOC105638878 [Jatropha curcas]
13 Hb_007672_060 0.0861315407 transcription factor TF Family: SWI/SNF-BAF60b Upstream activation factor subunit UAF30, putative [Ricinus communis]
14 Hb_003438_050 0.0867314634 - - PREDICTED: rab3 GTPase-activating protein catalytic subunit isoform X2 [Jatropha curcas]
15 Hb_002671_100 0.0867524317 - - PREDICTED: tRNA (guanine-N(7)-)-methyltransferase-like [Jatropha curcas]
16 Hb_004412_010 0.0872278539 - - -
17 Hb_000212_240 0.0880355829 - - short-chain dehydrogenase, putative [Ricinus communis]
18 Hb_001300_070 0.088418125 - - OTU domain-containing protein 6B, putative [Ricinus communis]
19 Hb_000205_100 0.0885674688 - - PREDICTED: exportin-4 [Jatropha curcas]
20 Hb_004117_130 0.0905841411 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]

Gene co-expression network

sample Hb_000526_050 Hb_000526_050 Hb_001579_320 Hb_001579_320 Hb_000526_050--Hb_001579_320 Hb_005098_010 Hb_005098_010 Hb_000526_050--Hb_005098_010 Hb_007594_130 Hb_007594_130 Hb_000526_050--Hb_007594_130 Hb_040262_010 Hb_040262_010 Hb_000526_050--Hb_040262_010 Hb_004881_020 Hb_004881_020 Hb_000526_050--Hb_004881_020 Hb_003375_070 Hb_003375_070 Hb_000526_050--Hb_003375_070 Hb_001946_010 Hb_001946_010 Hb_001579_320--Hb_001946_010 Hb_003952_070 Hb_003952_070 Hb_001579_320--Hb_003952_070 Hb_000193_190 Hb_000193_190 Hb_001579_320--Hb_000193_190 Hb_003025_110 Hb_003025_110 Hb_001579_320--Hb_003025_110 Hb_001579_320--Hb_040262_010 Hb_005098_010--Hb_003375_070 Hb_001135_220 Hb_001135_220 Hb_005098_010--Hb_001135_220 Hb_001300_070 Hb_001300_070 Hb_005098_010--Hb_001300_070 Hb_002273_120 Hb_002273_120 Hb_005098_010--Hb_002273_120 Hb_002785_050 Hb_002785_050 Hb_005098_010--Hb_002785_050 Hb_007594_130--Hb_004881_020 Hb_007594_130--Hb_003952_070 Hb_002671_100 Hb_002671_100 Hb_007594_130--Hb_002671_100 Hb_000212_240 Hb_000212_240 Hb_007594_130--Hb_000212_240 Hb_003030_070 Hb_003030_070 Hb_007594_130--Hb_003030_070 Hb_007594_130--Hb_040262_010 Hb_040262_010--Hb_002671_100 Hb_103012_010 Hb_103012_010 Hb_040262_010--Hb_103012_010 Hb_040262_010--Hb_001946_010 Hb_007317_110 Hb_007317_110 Hb_040262_010--Hb_007317_110 Hb_000260_170 Hb_000260_170 Hb_040262_010--Hb_000260_170 Hb_004881_020--Hb_003952_070 Hb_006252_040 Hb_006252_040 Hb_004881_020--Hb_006252_040 Hb_004881_020--Hb_000212_240 Hb_004881_020--Hb_103012_010 Hb_004881_020--Hb_002671_100 Hb_003375_070--Hb_001135_220 Hb_000139_370 Hb_000139_370 Hb_003375_070--Hb_000139_370 Hb_011930_160 Hb_011930_160 Hb_003375_070--Hb_011930_160 Hb_003375_070--Hb_002273_120 Hb_003375_070--Hb_003025_110 Hb_007632_240 Hb_007632_240 Hb_003375_070--Hb_007632_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.6925 9.91966 8.74907 13.3692 23.2478 22.9735
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.8892 15.4567 6.69006 12.9738 11.6754

CAGE analysis