Hb_000527_030

Information

Type -
Description -
Location Contig527: 40903-44371
Sequence    

Annotation

kegg
ID rcu:RCOM_1062670
description hypothetical protein
nr
ID XP_012091541.1
description PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
swissprot
ID Q9LSK9
description Uncharacterized protein At5g65660 OS=Arabidopsis thaliana GN=At5g65660 PE=2 SV=1
trembl
ID A0A067JLM4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21386 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47029: 44119-44539
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000527_030 0.0 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
2 Hb_004007_080 0.0666767909 - - PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]
3 Hb_002453_040 0.0791516738 - - PREDICTED: uncharacterized protein LOC105636487 [Jatropha curcas]
4 Hb_052530_010 0.0835391698 - - PREDICTED: uncharacterized protein At3g49140 isoform X2 [Jatropha curcas]
5 Hb_074660_010 0.0905464884 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
6 Hb_004241_160 0.0925989514 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-7 [Jatropha curcas]
7 Hb_000083_280 0.093890344 - - copper ion binding protein, putative [Ricinus communis]
8 Hb_103339_010 0.0955474439 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_000445_320 0.0975284683 - - PREDICTED: wall-associated receptor kinase 2-like isoform X2 [Gossypium raimondii]
10 Hb_000160_110 0.0983871612 - - PREDICTED: uncharacterized protein LOC100253584 [Vitis vinifera]
11 Hb_004422_030 0.1015281217 - - PREDICTED: serine/threonine-protein kinase SAPK7-like [Jatropha curcas]
12 Hb_001153_230 0.1015281825 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
13 Hb_008226_050 0.1040521968 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b [Jatropha curcas]
14 Hb_000283_090 0.1092238895 - - Photosystem II reaction center W protein, chloroplast precursor, putative [Ricinus communis]
15 Hb_006332_030 0.1095653339 - - RecName: Full=Valine N-monooxygenase 1; AltName: Full=Cytochrome P450 79D1 [Manihot esculenta]
16 Hb_007681_020 0.1106116623 - - transferase, putative [Ricinus communis]
17 Hb_011859_010 0.113308445 - - hypothetical protein VITISV_027923 [Vitis vinifera]
18 Hb_006519_020 0.1147536467 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
19 Hb_000816_080 0.1151712136 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
20 Hb_113974_010 0.1167746325 - - DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000527_030 Hb_000527_030 Hb_004007_080 Hb_004007_080 Hb_000527_030--Hb_004007_080 Hb_002453_040 Hb_002453_040 Hb_000527_030--Hb_002453_040 Hb_052530_010 Hb_052530_010 Hb_000527_030--Hb_052530_010 Hb_074660_010 Hb_074660_010 Hb_000527_030--Hb_074660_010 Hb_004241_160 Hb_004241_160 Hb_000527_030--Hb_004241_160 Hb_000083_280 Hb_000083_280 Hb_000527_030--Hb_000083_280 Hb_006519_020 Hb_006519_020 Hb_004007_080--Hb_006519_020 Hb_004007_080--Hb_052530_010 Hb_000816_080 Hb_000816_080 Hb_004007_080--Hb_000816_080 Hb_088118_010 Hb_088118_010 Hb_004007_080--Hb_088118_010 Hb_103339_010 Hb_103339_010 Hb_004007_080--Hb_103339_010 Hb_002453_040--Hb_052530_010 Hb_000445_320 Hb_000445_320 Hb_002453_040--Hb_000445_320 Hb_000193_170 Hb_000193_170 Hb_002453_040--Hb_000193_170 Hb_006332_030 Hb_006332_030 Hb_002453_040--Hb_006332_030 Hb_003464_040 Hb_003464_040 Hb_002453_040--Hb_003464_040 Hb_003226_040 Hb_003226_040 Hb_052530_010--Hb_003226_040 Hb_052530_010--Hb_000445_320 Hb_052530_010--Hb_000816_080 Hb_052530_010--Hb_000193_170 Hb_052530_010--Hb_003464_040 Hb_001153_230 Hb_001153_230 Hb_074660_010--Hb_001153_230 Hb_001564_100 Hb_001564_100 Hb_074660_010--Hb_001564_100 Hb_000157_060 Hb_000157_060 Hb_074660_010--Hb_000157_060 Hb_074660_010--Hb_004007_080 Hb_002837_120 Hb_002837_120 Hb_074660_010--Hb_002837_120 Hb_000160_110 Hb_000160_110 Hb_004241_160--Hb_000160_110 Hb_008226_050 Hb_008226_050 Hb_004241_160--Hb_008226_050 Hb_006573_310 Hb_006573_310 Hb_004241_160--Hb_006573_310 Hb_005914_100 Hb_005914_100 Hb_004241_160--Hb_005914_100 Hb_003641_040 Hb_003641_040 Hb_004241_160--Hb_003641_040 Hb_039812_010 Hb_039812_010 Hb_000083_280--Hb_039812_010 Hb_004422_030 Hb_004422_030 Hb_000083_280--Hb_004422_030 Hb_000283_090 Hb_000283_090 Hb_000083_280--Hb_000283_090 Hb_113974_010 Hb_113974_010 Hb_000083_280--Hb_113974_010 Hb_000083_280--Hb_004007_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.731352 17.9108 4.5853 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0510958 1.1152

CAGE analysis