Hb_000529_170

Information

Type -
Description -
Location Contig529: 238096-244193
Sequence    

Annotation

kegg
ID cmo:103498991
description uncharacterized LOC103498991
nr
ID KDP28920.1
description hypothetical protein JCGZ_14691 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K9F5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14691 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000529_170 0.0 - - hypothetical protein JCGZ_14691 [Jatropha curcas]
2 Hb_001726_020 0.0765295659 - - PREDICTED: endophilin-A1 [Jatropha curcas]
3 Hb_000039_160 0.0771631716 - - PREDICTED: probable serine/threonine-protein kinase abkC [Jatropha curcas]
4 Hb_005539_280 0.0811617672 - - PREDICTED: uncharacterized protein LOC105644562 [Jatropha curcas]
5 Hb_000250_060 0.0903953437 - - PREDICTED: 28S ribosomal protein S29, mitochondrial [Jatropha curcas]
6 Hb_001226_040 0.0919963504 - - protein with unknown function [Ricinus communis]
7 Hb_001245_100 0.0925576713 transcription factor TF Family: Alfin-like ATP synthase alpha subunit mitochondrial, putative [Ricinus communis]
8 Hb_027380_050 0.0933290853 - - PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Jatropha curcas]
9 Hb_008221_140 0.0954218079 - - PREDICTED: uncharacterized protein LOC105644226 [Jatropha curcas]
10 Hb_001314_070 0.0955511987 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002878_020 0.096894916 - - mitochondrial carrier protein, putative [Ricinus communis]
12 Hb_003086_150 0.0970387395 - - PREDICTED: uncharacterized protein LOC105635789 [Jatropha curcas]
13 Hb_002660_010 0.0972861758 transcription factor TF Family: ARF PREDICTED: auxin response factor 18-like [Jatropha curcas]
14 Hb_002046_180 0.0992439564 - - PREDICTED: uncharacterized protein LOC105641295 [Jatropha curcas]
15 Hb_003052_190 0.1005142071 - - PREDICTED: uncharacterized protein LOC105641937 isoform X2 [Jatropha curcas]
16 Hb_002110_150 0.1009673442 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
17 Hb_000917_060 0.1010854909 - - PREDICTED: GTP-binding protein At2g22870 [Jatropha curcas]
18 Hb_002499_040 0.1016151331 - - PREDICTED: probable serine/threonine-protein kinase GCN2 isoform X2 [Jatropha curcas]
19 Hb_004586_340 0.1026970959 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
20 Hb_002799_110 0.1053380422 - - PREDICTED: probable protein phosphatase 2C 60 [Jatropha curcas]

Gene co-expression network

sample Hb_000529_170 Hb_000529_170 Hb_001726_020 Hb_001726_020 Hb_000529_170--Hb_001726_020 Hb_000039_160 Hb_000039_160 Hb_000529_170--Hb_000039_160 Hb_005539_280 Hb_005539_280 Hb_000529_170--Hb_005539_280 Hb_000250_060 Hb_000250_060 Hb_000529_170--Hb_000250_060 Hb_001226_040 Hb_001226_040 Hb_000529_170--Hb_001226_040 Hb_001245_100 Hb_001245_100 Hb_000529_170--Hb_001245_100 Hb_001726_020--Hb_005539_280 Hb_001726_020--Hb_000250_060 Hb_000504_140 Hb_000504_140 Hb_001726_020--Hb_000504_140 Hb_005779_060 Hb_005779_060 Hb_001726_020--Hb_005779_060 Hb_000783_020 Hb_000783_020 Hb_001726_020--Hb_000783_020 Hb_008566_050 Hb_008566_050 Hb_000039_160--Hb_008566_050 Hb_000117_090 Hb_000117_090 Hb_000039_160--Hb_000117_090 Hb_008725_260 Hb_008725_260 Hb_000039_160--Hb_008725_260 Hb_000039_160--Hb_001245_100 Hb_000155_200 Hb_000155_200 Hb_000039_160--Hb_000155_200 Hb_005539_280--Hb_000504_140 Hb_005539_280--Hb_000250_060 Hb_058999_020 Hb_058999_020 Hb_005539_280--Hb_058999_020 Hb_001633_050 Hb_001633_050 Hb_005539_280--Hb_001633_050 Hb_005539_280--Hb_005779_060 Hb_001633_210 Hb_001633_210 Hb_000250_060--Hb_001633_210 Hb_000297_010 Hb_000297_010 Hb_000250_060--Hb_000297_010 Hb_010812_120 Hb_010812_120 Hb_000250_060--Hb_010812_120 Hb_002046_180 Hb_002046_180 Hb_000250_060--Hb_002046_180 Hb_002499_040 Hb_002499_040 Hb_001226_040--Hb_002499_040 Hb_005348_140 Hb_005348_140 Hb_001226_040--Hb_005348_140 Hb_000757_060 Hb_000757_060 Hb_001226_040--Hb_000757_060 Hb_000538_270 Hb_000538_270 Hb_001226_040--Hb_000538_270 Hb_000556_160 Hb_000556_160 Hb_001226_040--Hb_000556_160 Hb_008221_140 Hb_008221_140 Hb_001226_040--Hb_008221_140 Hb_001766_060 Hb_001766_060 Hb_001245_100--Hb_001766_060 Hb_000667_070 Hb_000667_070 Hb_001245_100--Hb_000667_070 Hb_005846_040 Hb_005846_040 Hb_001245_100--Hb_005846_040 Hb_027380_050 Hb_027380_050 Hb_001245_100--Hb_027380_050 Hb_003151_040 Hb_003151_040 Hb_001245_100--Hb_003151_040 Hb_001245_100--Hb_002046_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.804367 0.662572 0.723036 0.295015 0.459877 0.570413
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.732033 1.19165 1.27684 0.767225 0.543938

CAGE analysis