Hb_000529_240

Information

Type -
Description -
Location Contig529: 299329-300639
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000529_240 0.0 - - -
2 Hb_003209_030 0.1756168961 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
3 Hb_001495_060 0.1775299213 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
4 Hb_008667_050 0.1796893133 - - PREDICTED: serine/threonine-protein kinase HT1-like [Malus domestica]
5 Hb_000331_320 0.1848131565 - - -
6 Hb_001047_140 0.2244299984 - - -
7 Hb_000453_210 0.2280229162 - - hypothetical protein PHAVU_006G019800g [Phaseolus vulgaris]
8 Hb_009139_010 0.2446484001 - - putative Phospholipid-Diacylglycerol acyltransferase [Elaeis guineensis]
9 Hb_000275_040 0.246994759 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
10 Hb_005690_020 0.2639140893 - - hypothetical protein POPTR_0006s08200g [Populus trichocarpa]
11 Hb_000179_150 0.2655504247 - - hypothetical protein ZEAMMB73_153699 [Zea mays]
12 Hb_000803_040 0.2670219454 - - -
13 Hb_007451_060 0.2776993847 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
14 Hb_002685_180 0.2789481613 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
15 Hb_030619_010 0.2870435675 - - -
16 Hb_000331_310 0.2871297566 - - PREDICTED: uncharacterized protein LOC105640232 [Jatropha curcas]
17 Hb_001143_010 0.2906222447 - - -
18 Hb_032202_030 0.2942694724 - - -
19 Hb_001864_030 0.2954968405 - - thioredoxin h [Hevea brasiliensis]
20 Hb_001017_120 0.2977837604 - - -

Gene co-expression network

sample Hb_000529_240 Hb_000529_240 Hb_003209_030 Hb_003209_030 Hb_000529_240--Hb_003209_030 Hb_001495_060 Hb_001495_060 Hb_000529_240--Hb_001495_060 Hb_008667_050 Hb_008667_050 Hb_000529_240--Hb_008667_050 Hb_000331_320 Hb_000331_320 Hb_000529_240--Hb_000331_320 Hb_001047_140 Hb_001047_140 Hb_000529_240--Hb_001047_140 Hb_000453_210 Hb_000453_210 Hb_000529_240--Hb_000453_210 Hb_003209_030--Hb_000331_320 Hb_003209_030--Hb_008667_050 Hb_003209_030--Hb_000453_210 Hb_003209_030--Hb_001495_060 Hb_003209_030--Hb_001047_140 Hb_001495_060--Hb_000453_210 Hb_002685_180 Hb_002685_180 Hb_001495_060--Hb_002685_180 Hb_001143_010 Hb_001143_010 Hb_001495_060--Hb_001143_010 Hb_001495_060--Hb_001047_140 Hb_008667_050--Hb_000331_320 Hb_008667_050--Hb_001047_140 Hb_008667_050--Hb_000453_210 Hb_005690_020 Hb_005690_020 Hb_008667_050--Hb_005690_020 Hb_000331_320--Hb_001047_140 Hb_000331_320--Hb_005690_020 Hb_000331_320--Hb_000453_210 Hb_001864_030 Hb_001864_030 Hb_001047_140--Hb_001864_030 Hb_001047_140--Hb_000453_210 Hb_000331_310 Hb_000331_310 Hb_001047_140--Hb_000331_310 Hb_004502_080 Hb_004502_080 Hb_001047_140--Hb_004502_080 Hb_000453_210--Hb_001143_010 Hb_000453_210--Hb_002685_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.185837 0.713837 0 0 0.410046 0.2575
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.3082 1.02933 0 0.118072 0

CAGE analysis