Hb_000530_040

Information

Type transcription factor
Description TF Family: HB
Location Contig530: 30854-37174
Sequence    

Annotation

kegg
ID pop:POPTR_0014s15010g
description POPTRDRAFT_834933; hypothetical protein
nr
ID XP_012086344.1
description PREDICTED: homeobox-leucine zipper protein HDG2 isoform X1 [Jatropha curcas]
swissprot
ID Q94C37
description Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana GN=HDG2 PE=2 SV=1
trembl
ID A0A067JPN9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22872 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox-leucine zipper protein hdg2 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47309: 30750-31622 , PASA_asmbl_47310: 34558-36774 , PASA_asmbl_47311: 36119-36469 , PASA_asmbl_47313: 37737-38010
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000530_040 0.0 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG2 isoform X1 [Jatropha curcas]
2 Hb_001424_010 0.0311014148 - - serine/threonine protein kinase, putative [Ricinus communis]
3 Hb_000697_030 0.0401131586 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Pyrus x bretschneideri]
4 Hb_003573_030 0.0461365446 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
5 Hb_001975_120 0.0473233934 - - chlorophyll a/b binding protein type II [Glycine max]
6 Hb_000069_220 0.0545603815 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF023 [Jatropha curcas]
7 Hb_078954_030 0.057815381 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000281_120 0.0594305665 - - protein binding protein, putative [Ricinus communis]
9 Hb_016371_010 0.0617855024 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
10 Hb_179129_010 0.0626423678 - - hypothetical protein POPTR_0018s10470g [Populus trichocarpa]
11 Hb_003651_030 0.0628425806 - - lyase, putative [Ricinus communis]
12 Hb_004411_010 0.0653293454 - - PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X5 [Gossypium raimondii]
13 Hb_001343_030 0.0672261541 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Jatropha curcas]
14 Hb_000069_440 0.0693503186 - - PREDICTED: uncharacterized protein LOC105642861 [Jatropha curcas]
15 Hb_009476_030 0.0743718416 - - fatty acid desaturase [Manihot esculenta]
16 Hb_000359_050 0.0748049627 - - Oxygen-evolving enhancer protein 2, chloroplast precursor, putative [Ricinus communis]
17 Hb_001675_090 0.0748866749 - - Photosystem I reaction center subunit VI, chloroplast precursor, putative [Ricinus communis]
18 Hb_000608_270 0.0753731847 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001159_050 0.0757347701 - - PREDICTED: uncharacterized protein LOC105645952 [Jatropha curcas]
20 Hb_000210_030 0.0759304303 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP6 [Jatropha curcas]

Gene co-expression network

sample Hb_000530_040 Hb_000530_040 Hb_001424_010 Hb_001424_010 Hb_000530_040--Hb_001424_010 Hb_000697_030 Hb_000697_030 Hb_000530_040--Hb_000697_030 Hb_003573_030 Hb_003573_030 Hb_000530_040--Hb_003573_030 Hb_001975_120 Hb_001975_120 Hb_000530_040--Hb_001975_120 Hb_000069_220 Hb_000069_220 Hb_000530_040--Hb_000069_220 Hb_078954_030 Hb_078954_030 Hb_000530_040--Hb_078954_030 Hb_001424_010--Hb_078954_030 Hb_179129_010 Hb_179129_010 Hb_001424_010--Hb_179129_010 Hb_001424_010--Hb_000697_030 Hb_016371_010 Hb_016371_010 Hb_001424_010--Hb_016371_010 Hb_000025_700 Hb_000025_700 Hb_001424_010--Hb_000025_700 Hb_000697_030--Hb_000069_220 Hb_000697_030--Hb_003573_030 Hb_004411_010 Hb_004411_010 Hb_000697_030--Hb_004411_010 Hb_000697_030--Hb_001975_120 Hb_000281_120 Hb_000281_120 Hb_003573_030--Hb_000281_120 Hb_003651_030 Hb_003651_030 Hb_003573_030--Hb_003651_030 Hb_000210_030 Hb_000210_030 Hb_003573_030--Hb_000210_030 Hb_003573_030--Hb_000069_220 Hb_005345_020 Hb_005345_020 Hb_001975_120--Hb_005345_020 Hb_001975_120--Hb_003573_030 Hb_009476_030 Hb_009476_030 Hb_001975_120--Hb_009476_030 Hb_001975_120--Hb_001424_010 Hb_000069_220--Hb_004411_010 Hb_007853_030 Hb_007853_030 Hb_000069_220--Hb_007853_030 Hb_000069_220--Hb_000210_030 Hb_078954_030--Hb_179129_010 Hb_004346_050 Hb_004346_050 Hb_078954_030--Hb_004346_050 Hb_078954_030--Hb_000025_700 Hb_078954_030--Hb_016371_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.821745 11.1105 3.33897 0 0.0133051
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0161597 0.0254324 0 0.020187 9.17946

CAGE analysis